RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 COMMD3-BMI1R4GMX3 469 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 U3KQV3 271 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 H3BN98 237 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 ACOT8O14734 319 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 XRCC2O43543 280 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 E2F6O75461 281 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 IGHV2-70P01814 119 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 LCATP04180 440 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 DBHP09172 617 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 T-ENOLP0DO92 83 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 ANXA8P13928 327 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 DDOSTP39656 456 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 GATA4P43694 442 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 SLC6A9P48067 706 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 MS4A2Q01362 244 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 TAF13Q15543 124 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 CORO6Q6QEF8 472 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 CFAP77Q6ZQR2 320 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 LINC00346Q8IVM7 164 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 FTMTQ8N4E7 242 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 SLC7A6Q92536 515 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 GTF3AQ92664 365 aaKnown RBP14.15□□□□□ -0.14
USB1-211ENST00000565662 COPS4Q9BT78 406 aa14.15□□□□□ -0.14
USB1-211ENST00000565662 POLR3KQ9Y2Y1 108 aaPredicted RBP14.15□□□□□ -0.14
USB1-211ENST00000565662 ANK3Q12955 4377 aaKnown RBP14.15□□□□□ -0.14
USB1-211ENST00000565662 DYSFO75923 2080 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 MXRA5Q9NR99 2828 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.14□□□□□ -0.15
USB1-211ENST00000565662 A8MXK9 166 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 GMDSO60547 372 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 ATP5HO75947 161 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 HMGN1P05114 100 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 SPI1P17947 270 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 CRMP1Q14194 572 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 ESCO2Q56NI9 601 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 TMEM255AQ5JRV8 349 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 OR2T2Q6IF00 324 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 USP43Q70EL4 1123 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 ADGRG5Q8IZF4 528 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 CYB561A3Q8NBI2 242 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 OR6K6Q8NGW6 343 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 OR11L1Q8NGX0 322 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 NANPQ8TBE9 248 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 SPRYD4Q8WW59 207 aaPredicted RBP14.14□□□□□ -0.15
USB1-211ENST00000565662 ITLN1Q8WWA0 313 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 NRBF2Q96F24 287 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 PLEKHA8Q96JA3 519 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 MEGF10Q96KG7 1140 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 DDOQ99489 341 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 KCNJ15Q99712 375 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 PLA2G12AQ9BZM1 189 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 NMNAT2Q9BZQ4 307 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 MMADHCQ9H3L0 296 aaPredicted RBP14.14□□□□□ -0.15
USB1-211ENST00000565662 PATZ1Q9HBE1 687 aaKnown RBP14.14□□□□□ -0.15
USB1-211ENST00000565662 PNRC2Q9NPJ4 139 aaKnown RBP14.14□□□□□ -0.15
USB1-211ENST00000565662 G6PC2Q9NQR9 355 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 MRPL22Q9NWU5 206 aaKnown RBP14.14□□□□□ -0.15
USB1-211ENST00000565662 MRPL15Q9P015 296 aaKnown RBP14.14□□□□□ -0.15
USB1-211ENST00000565662 ENOPH1Q9UHY7 261 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 COL6A5A8TX70 2615 aa14.14□□□□□ -0.15
USB1-211ENST00000565662 PRODHO43272 600 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 DNAJC8O75937 253 aaPredicted RBP14.13□□□□□ -0.15
USB1-211ENST00000565662 CD200P41217 278 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 MMP16P51512 607 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 GK2Q14410 553 aaPredicted RBP14.13□□□□□ -0.15
USB1-211ENST00000565662 FAHD2BQ6P2I3 314 aaPredicted RBP14.13□□□□□ -0.15
USB1-211ENST00000565662 Q6ZR03 302 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 IL17RELQ6ZVW7 336 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 NLRC3Q7RTR2 1065 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 DCXRQ7Z4W1 244 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 C1QL2Q7Z5L3 287 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 SPATA24Q86W54 205 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 LRRC28Q86X40 367 aaPredicted RBP14.13□□□□□ -0.15
USB1-211ENST00000565662 OR52H1Q8NGJ2 320 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 OR8D4Q8NGM9 314 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 FAHD2AQ96GK7 314 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 INTS14Q96SY0 518 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 FEVQ99581 238 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 FN3KQ9H479 309 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 POFUT1Q9H488 388 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 LPAR2Q9HBW0 351 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 GCM1Q9NP62 436 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 UBAP1Q9NZ09 502 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 MIOXQ9UGB7 285 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 ZNF391Q9UJN7 358 aa14.13□□□□□ -0.15
USB1-211ENST00000565662 TMEM178BH3BS89 294 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 WNT9BO14905 357 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 PLPP2O43688 288 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 SOX14O95416 240 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 GPANK1O95872 356 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 SPARCP09486 303 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 HSD11B1P28845 292 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 PYCR1P32322 319 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 SLC35D3Q5M8T2 416 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 OR5AS1Q8N127 324 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 ZNF454Q8N9F8 522 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 Q8TCH9 128 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 CANT1Q8WVQ1 401 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 SLAMF6Q96DU3 332 aa14.12□□□□□ -0.15
USB1-211ENST00000565662 MAP6Q96JE9 813 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms