RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 F5H5K5 113 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 TBX1O43435 398 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 SYNGR3O43761 229 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 MAS1P04201 325 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 ERCC1P07992 297 aaPredicted RBP12.08□□□□□ -0.48
TPM1-215ENST00000558868 ZNF20P17024 532 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 IGFBP3P17936 291 aaPredicted RBP12.08□□□□□ -0.48
TPM1-215ENST00000558868 CCL1P22362 96 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 MPGP29372 298 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 PTGER4P35408 488 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 SLC6A9P48067 706 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 CAPZA1P52907 286 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 KRTCAP3Q53RY4 240 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 UBE2NLQ5JXB2 153 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 FBXW9Q5XUX1 488 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 TMEM53Q6P2H8 277 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 FAM180AQ6UWF9 173 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.08□□□□□ -0.48
TPM1-215ENST00000558868 COMMD2Q86X83 199 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 SKA3Q8IX90 412 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 OR8H2Q8N162 312 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 NKAIN3Q8N8D7 197 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 OR8B12Q8NGG6 310 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 OR5D14Q8NGL3 314 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 OR51E1Q8TCB6 317 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 ORAI1Q96D31 301 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 SOSTQ9BQB4 213 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 SRRQ9GZT4 340 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 OR10A2Q9H208 303 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 RNF121Q9H920 327 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 SLC17A5Q9NRA2 495 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 MALT1Q9UDY8 824 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 ZNF407Q9C0G0 2248 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 PHF3Q92576 2039 aaKnown RBP12.08□□□□□ -0.48
TPM1-215ENST00000558868 TNRC6AQ8NDV7 1962 aaKnown RBP12.07□□□□□ -0.48
TPM1-215ENST00000558868 A0A1B0GTI1 187 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 MTRF1O75570 445 aaKnown RBP12.07□□□□□ -0.48
TPM1-215ENST00000558868 CNOT4O95628 575 aaKnown RBP12.07□□□□□ -0.48
TPM1-215ENST00000558868 IGHV3-9P01782 118 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 PDGFAP04085 211 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 COX5BP10606 129 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 SNRPBP14678 240 aaKnown RBP12.07□□□□□ -0.48
TPM1-215ENST00000558868 GABRA1P14867 456 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 ADRA2CP18825 462 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 ELK1P19419 428 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 CRYGSP22914 178 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 ARR3P36575 388 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 NR4A2P43354 598 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 HTR5AP47898 357 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 PSG4Q00888 419 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 FAPQ12884 760 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 RIN1Q13671 783 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 IL18Q14116 193 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 PYDC2Q56P42 97 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 HES5Q5TA89 166 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 ZNF774Q6NX45 483 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 PLXDC2Q6UX71 529 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 PGAP1Q75T13 922 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 PRSS45Q7RTY3 260 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 LYSMD2Q8IV50 215 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 CHPT1Q8WUD6 406 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 NANOS1Q8WY41 292 aaKnown RBP12.07□□□□□ -0.48
TPM1-215ENST00000558868 FGGYQ96C11 551 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 ABHD17AQ96GS6 310 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 GPR137Q96N19 417 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 GFI1Q99684 422 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 WNT5BQ9H1J7 359 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 GPR84Q9NQS5 396 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 TAS2R4Q9NYW5 299 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 EXTL2Q9UBQ6 330 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 STEAP1Q9UHE8 339 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 ZNF391Q9UJN7 358 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 N6AMT1Q9Y5N5 214 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 DNAJC13O75165 2243 aa12.07□□□□□ -0.48
TPM1-215ENST00000558868 H3BSH0 61 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 SLC17A2O00624 439 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 UBL3O95164 117 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 PAHP00439 452 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 HOXD4P09016 255 aaPredicted RBP12.06□□□□□ -0.48
TPM1-215ENST00000558868 MMP7P09237 267 aaPredicted RBP12.06□□□□□ -0.48
TPM1-215ENST00000558868 CD37P11049 281 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 GNALP38405 381 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 DDOSTP39656 456 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 PITPNAQ00169 270 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 TGFBR3Q03167 851 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 RAB11BQ15907 218 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 ZNF79Q15937 498 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 EIF2S3LQ2VIR3 472 aaKnown RBP12.06□□□□□ -0.48
TPM1-215ENST00000558868 TRIM16LQ309B1 348 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 KRTAP27-1Q3LI81 207 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 PLEKHN1Q494U1 663 aaPredicted RBP12.06□□□□□ -0.48
TPM1-215ENST00000558868 ACSF3Q4G176 576 aaPredicted RBP12.06□□□□□ -0.48
TPM1-215ENST00000558868 NSUN5P2Q63ZY6 315 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 ANKRD16Q6P6B7 361 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 FAM214BQ7L5A3 538 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 CCDC36Q8IYA8 594 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 OR5M9Q8NGP3 310 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 SETD6Q8TBK2 473 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 RAB40AQ8WXH6 277 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 C10orf35Q96D05 121 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms