RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RADILQ96JH8 1075 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 SLX1AQ9BQ83 275 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 CST11Q9H112 138 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 PRMT8Q9NR22 394 aaPredicted RBP12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 BOD1L1Q8NFC6 3051 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF878C9JN71 531 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 STK17BO94768 372 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 DBHP09172 617 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 PNLIPP16233 465 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 RAB3AP20336 220 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 GABRR1P24046 479 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 ATP1B3P54709 279 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 S100A10P60903 97 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 CSRP2Q16527 193 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 ATPAF1Q5TC12 328 aaPredicted RBP12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 TMEM244Q5VVB8 128 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF454Q8N9F8 522 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 ASB10Q8WXI3 467 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 HGDQ93099 445 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 PGAM5Q96HS1 289 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 EVA1AQ9H8M9 152 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 UPB1Q9UBR1 384 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 ROS1P08922 2347 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 CACNA1DQ01668 2161 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 A0A1W2PQM1 296 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 RPS10-NUDT3A0A1W2PQS6 291 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 FAM221AA4D161 298 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 OR2AT4A6NND4 320 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 SOCS1O15524 211 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 ERCC1P07992 297 aaPredicted RBP12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 GLULP15104 373 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 CD96P40200 585 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 OR5D14Q8NGL3 314 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 C15orf40Q8WUR7 153 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 PPP1R1CQ8WVI7 109 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 CCDC74BQ96LY2 380 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 UCN2Q96RP3 112 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 TAS2R3Q9NYW6 316 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 DSPP15924 2871 aaKnown RBP12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 PLSCR5A0PG75 271 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 OR5H14A6NHG9 310 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 SLC33A1O00400 549 aaPredicted RBP12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 TTRP02766 147 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 CCL4P13236 92 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 DLSTP36957 453 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 OR3A2P47893 321 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 GK2Q14410 553 aaPredicted RBP12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 TUSC1Q2TAM9 212 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 ELFN2Q5R3F8 820 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 ZBTB44Q8NCP5 570 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 MVB12AQ96EY5 273 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF285Q96NJ3 590 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 PRDM6Q9NQX0 595 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 SFTPBP07988 381 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 HOXB5P09067 269 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 RPS18P62269 152 aaKnown RBP12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 CDCP2Q5VXM1 449 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 OR1M1Q8NGA1 313 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 MYOTQ9UBF9 498 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 MRPS28Q9Y2Q9 187 aaKnown RBP12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 ATG2AQ2TAZ0 1938 aa12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 DIDO1Q9BTC0 2240 aaKnown RBP12.15□□□□□ -0.46
PRPF40B-209ENST00000548825 ESPL1Q14674 2120 aa12.15□□□□□ -0.47
PRPF40B-209ENST00000548825 KANTRA0A1W2PQU2 76 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 DISC1C4P0D8 188 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 ZFAND5O76080 213 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 IGHG1P01857 330 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 FAHP16930 419 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 RAG2P55895 527 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 GABREP78334 506 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 C20orf196Q8IYI0 205 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 VRK1Q99986 396 aaPredicted RBP12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 PARP12Q9H0J9 701 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 GAREM1Q9H706 876 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 METTL8Q9H825 291 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 G6PC2Q9NQR9 355 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 PLEK2Q9NYT0 353 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 ZNF319Q9P2F9 582 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 GPN3Q9UHW5 284 aaPredicted RBP12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 A6NIZ1 184 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 ANGPTL7O43827 346 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 PDGFBP01127 241 aaPredicted RBP12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 VSIG8P0DPA2 414 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 RAP1BP61224 184 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 RAP1AP62834 184 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 CPEB2Q7Z5Q1 589 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 TMEM200AQ86VY9 491 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 OR51T1Q8NGJ9 327 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 OR2AE1Q8NHA4 323 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 CPNE2Q96FN4 548 aaPredicted RBP12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 MED30Q96HR3 178 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 VSIG4Q9Y279 399 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 A0A0B4J2A0 478 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 OR5H15A6NDH6 313 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 AGPAT2O15120 278 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 ADAP1O75689 374 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 LDOC1O95751 146 aaPredicted RBP12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 SCGB1D2O95969 90 aa12.14□□□□□ -0.47
PRPF40B-209ENST00000548825 OTX2P32243 289 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms