RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 DPY19L4Q7Z388 723 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 NAA40Q86UY6 237 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 TIGD4Q8IY51 512 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 BHLHE23Q8NDY6 225 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 OR2Z1Q8NG97 314 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 ELMOD3Q96FG2 381 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 CENPNQ96H22 339 aaPredicted RBP10.05□□□□□ -0.8
RAB5C-204ENST00000547517 DIRC2Q96SL1 478 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 CIB1Q99828 191 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 PKP2Q99959 881 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 PRRG3Q9BZD7 231 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 EGLN1Q9GZT9 426 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 MARCH7Q9H992 704 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 TREM2Q9NZC2 230 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 ZDHHC8Q9ULC8 765 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 FN1P02751 2386 aaKnown RBP10.04□□□□□ -0.8
RAB5C-204ENST00000547517 HIVEP2P31629 2446 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 CLDN25C9JDP6 229 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 H3BNX3 289 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 PRKYO43930 277 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 LILRA1O75019 489 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 ADH4P08319 380 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 TACSTD2P09758 323 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 SLC2A5P22732 501 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 TNFSF4P23510 183 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 HSD11B1P28845 292 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 EPHA2P29317 976 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 IL2RGP31785 369 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 OTX1P32242 354 aaPredicted RBP10.04□□□□□ -0.8
RAB5C-204ENST00000547517 CX3CR1P49238 355 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 GZMKP49863 264 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 HNRNPA0Q13151 305 aaKnown RBP10.04□□□□□ -0.8
RAB5C-204ENST00000547517 APOFQ13790 326 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 GK2Q14410 553 aaPredicted RBP10.04□□□□□ -0.8
RAB5C-204ENST00000547517 SPRNQ5BIV9 151 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 AVPI1Q5T686 147 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 CYB5R2Q6BCY4 276 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 ZFP1Q6P2D0 407 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 DRAM2Q6UX65 266 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 MRPL21Q7Z2W9 205 aaKnown RBP10.04□□□□□ -0.8
RAB5C-204ENST00000547517 ZNF283Q8N7M2 679 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 OR10AD1Q8NGE0 317 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 POM121Q96HA1 1249 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 RAB3IPQ96QF0 476 aaPredicted RBP10.04□□□□□ -0.8
RAB5C-204ENST00000547517 AMELYQ99218 206 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 KCNJ15Q99712 375 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 SOX7Q9BT81 388 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 ABHD6Q9BV23 337 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 RIBC2Q9H4K1 309 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 ENOPH1Q9UHY7 261 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 TMEFF2Q9UIK5 374 aaPredicted RBP10.04□□□□□ -0.8
RAB5C-204ENST00000547517 N6AMT1Q9Y5N5 214 aa10.04□□□□□ -0.8
RAB5C-204ENST00000547517 ABCA1O95477 2261 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 C5orf63A6NC05 138 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 CCDC182A6NF36 153 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 ZAR1LA6NP61 321 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 A8MV72 311 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-204ENST00000547517 IQCF6A8MYZ5 107 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 WNT9BO14905 357 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 ANXA2P07355 339 aaKnown RBP10.03□□□□□ -0.8
RAB5C-204ENST00000547517 CD55P08174 381 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 MRPL3P09001 348 aaKnown RBP10.03□□□□□ -0.8
RAB5C-204ENST00000547517 SELEP16581 610 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 CRYBB2P43320 205 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 SLC15A1P46059 708 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 GRB2P62993 217 aaKnown RBP10.03□□□□□ -0.8
RAB5C-204ENST00000547517 MVKQ03426 396 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 CDK5R2Q13319 367 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 HFEQ30201 348 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 SLC35D3Q5M8T2 416 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 GLYATL3Q5SZD4 288 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 LCN1P1Q5VSP4 162 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 SLX4IPQ5VYV7 408 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 C12orf73Q69YU5 71 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 PGAP1Q75T13 922 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 SHFQ7M4L6 423 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 BCDIN3DQ7Z5W3 292 aaKnown RBP10.03□□□□□ -0.8
RAB5C-204ENST00000547517 OR8G5Q8NG78 346 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 OR2AE1Q8NHA4 323 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 CLDND2Q8NHS1 167 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 OTOSQ8NHW6 89 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 RNF133Q8WVZ7 376 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 ITLN1Q8WWA0 313 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 CCL17Q92583 94 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 MSI2Q96DH6 328 aaKnown RBP10.03□□□□□ -0.8
RAB5C-204ENST00000547517 ZNF582Q96NG8 517 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-204ENST00000547517 DNAJC27Q9NZQ0 273 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 KLHDC2Q9Y2U9 406 aa10.03□□□□□ -0.8
RAB5C-204ENST00000547517 LOC100289279A0A1B0GTE1 492 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 ERICH4A6NGS2 130 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 TBX1O43435 398 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 LYNP07948 512 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 H2BFMP0C1H6 154 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 RBMXP38159 391 aaKnown RBP10.02□□□□□ -0.81
RAB5C-204ENST00000547517 OPRL1P41146 370 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 TMEM33P57088 247 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 ZNF92Q03936 586 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 FAM166AQ6J272 317 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 TCEANCQ8N8B7 351 aa10.02□□□□□ -0.81
RAB5C-204ENST00000547517 ZNF454Q8N9F8 522 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms