RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 OR2T4Q8NH00 348 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 TAF15Q92804 592 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX55-212ENST00000544738 MUC13Q9H3R2 512 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 GCM1Q9NP62 436 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 IL20Q9NYY1 176 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 POLR3KQ9Y2Y1 108 aaPredicted RBP13.62□□□□□ -0.23
DDX55-212ENST00000544738 B2RBV5 119 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 F5H5K5 113 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 TMEM178BH3BS89 294 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 ACSM4P0C7M7 580 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 GGT2P36268 569 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 MAGEA2P43356 314 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 SLC6A9P48067 706 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 MMP16P51512 607 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 TPTEP56180 551 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 IL13RA1P78552 427 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 ZMYND11Q15326 602 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 KRTAP27-1Q3LI81 207 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 CLEC12AQ5QGZ9 265 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 CFAP77Q6ZQR2 320 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 RASSF6Q6ZTQ3 369 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 MEGF10Q96KG7 1140 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 SIGLEC11Q96RL6 698 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 SLC30A2Q9BRI3 323 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 FN3KQ9H479 309 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 MAGIXQ9H6Y5 334 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 EGLN3Q9H6Z9 239 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 TMEM100Q9NV29 134 aa13.61□□□□□ -0.23
DDX55-212ENST00000544738 KMT2CQ8NEZ4 4911 aaKnown RBP13.6□□□□□ -0.23
DDX55-212ENST00000544738 LRRC30A6NM36 301 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 BHLHE40O14503 412 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 CCNB2O95067 398 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 LCATP04180 440 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 TRAP1Q12931 704 aaKnown RBP13.6□□□□□ -0.23
DDX55-212ENST00000544738 ESCO2Q56NI9 601 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 DHFR2Q86XF0 187 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 C1orf87Q8N0U7 546 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 FITM2Q8N6M3 262 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 BHLHE23Q8NDY6 225 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 PROKR2Q8NFJ6 384 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 OR10AD1Q8NGE0 317 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 SPTSSAQ969W0 71 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 NSL1Q96IY1 281 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 BTBD10Q9BSF8 475 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 MRPL22Q9NWU5 206 aaKnown RBP13.6□□□□□ -0.23
DDX55-212ENST00000544738 OPN4Q9UHM6 478 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 BAIAP2Q9UQB8 552 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 LRCH1Q9Y2L9 728 aa13.6□□□□□ -0.23
DDX55-212ENST00000544738 A0A1B0GWJ7 208 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 A8MXK9 166 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 FSTL3O95633 263 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 GASTP01350 101 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 ATP6V1B2P21281 511 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 TRIM25Q14258 630 aaKnown RBP13.59□□□□□ -0.23
DDX55-212ENST00000544738 GK2Q14410 553 aaPredicted RBP13.59□□□□□ -0.23
DDX55-212ENST00000544738 ZNF181Q2M3W8 571 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 ZNF770Q6IQ21 691 aaPredicted RBP13.59□□□□□ -0.23
DDX55-212ENST00000544738 LNX2Q8N448 690 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 CELF2-AS1Q8N7Q2 184 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 OR9Q2Q8NGE9 314 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 OR4C15Q8NGM1 316 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 ERGIC1Q969X5 290 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 CCT8L2Q96SF2 557 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 DDOQ99489 341 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 SLITRK2Q9H156 845 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 WDR76Q9H967 626 aa13.59□□□□□ -0.23
DDX55-212ENST00000544738 PNRC2Q9NPJ4 139 aaKnown RBP13.59□□□□□ -0.23
DDX55-212ENST00000544738 NOP16Q9Y3C1 178 aaKnown RBP13.59□□□□□ -0.23
DDX55-212ENST00000544738 DNAJC9-AS1A6NH13 148 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 F5H0A9 414 aaPredicted RBP13.58□□□□□ -0.24
DDX55-212ENST00000544738 F5H5P2 479 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 H0YL77 283 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 M0R135 149 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 MLNRO43193 412 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 FSHBP01225 129 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 PYCR1P32322 319 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 GATA4P43694 442 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 SRSF4Q08170 494 aaKnown RBP13.58□□□□□ -0.24
DDX55-212ENST00000544738 DBPQ10586 325 aaPredicted RBP13.58□□□□□ -0.24
DDX55-212ENST00000544738 BAMBIQ13145 260 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 OCLNQ16625 522 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 FAM98BQ52LJ0 330 aaKnown RBP13.58□□□□□ -0.24
DDX55-212ENST00000544738 ZNF362Q5T0B9 420 aaPredicted RBP13.58□□□□□ -0.24
DDX55-212ENST00000544738 OR2T5Q6IEZ7 315 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 LCN8Q6JVE9 175 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 PGAP1Q75T13 922 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 MRPL21Q7Z2W9 205 aaKnown RBP13.58□□□□□ -0.24
DDX55-212ENST00000544738 NAA40Q86UY6 237 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 CYB561A3Q8NBI2 242 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 OR2T29Q8NH02 315 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 ZNF420Q8TAQ5 688 aaPredicted RBP13.58□□□□□ -0.24
DDX55-212ENST00000544738 DVL3Q92997 716 aaPredicted RBP13.58□□□□□ -0.24
DDX55-212ENST00000544738 SLCO4A1Q96BD0 722 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 ZNF799Q96GE5 643 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 MAP6Q96JE9 813 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 MRI1Q9BV20 369 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 SLC22A4Q9H015 551 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 REEP1Q9H902 201 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 TBC1D23Q9NUY8 699 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 MIOXQ9UGB7 285 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms