RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 PELI1Q96FA3 418 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 PIK3IP1Q96FE7 263 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 TMEM80Q96HE8 168 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 C4orf45Q96LM5 186 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 KCNJ15Q99712 375 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 COPS4Q9BT78 406 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 ALG8Q9BVK2 526 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 CDCA4Q9BXL8 241 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 G6PC2Q9NQR9 355 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 FAM206AQ9NX38 181 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 LSM2Q9Y333 95 aaKnown RBP9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 TMEM14AQ9Y6G1 99 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 NOTCH2Q04721 2471 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 NAV2Q8IVL1 2488 aa9.2□□□□□ -0.94
NPIPB3-210ENST00000542817 RAI1Q7Z5J4 1906 aaPredicted RBP9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 IQCMA0A1B0GVH7 501 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 DAPL1A0PJW8 107 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF670-ZNF695F2Z2N8 137 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 F5H5K5 113 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 M0R135 149 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 GPRIN2O60269 458 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF254O75437 659 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 SULT1C4O75897 302 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 LALBAP00709 142 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 MT-ND2P03891 347 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 INHBBP09529 407 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 SLC2A1P11166 492 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 DCTDP32321 178 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 ATP6V1E1P36543 226 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 GDI2P50395 445 aaKnown RBP9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 PRKXP51817 358 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 UCP2P55851 309 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 NANOS3P60323 173 aaKnown RBP9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 KRTAP10-9P60411 292 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 ERVS71-1P61550 626 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 ACTC1P68032 377 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 ACTA1P68133 377 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 GALK2Q01415 458 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 PLP2Q04941 152 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 OR2G6Q5TZ20 316 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 LIPNQ5VXI9 398 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF787Q6DD87 383 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 XAF1Q6GPH4 301 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 GPR141Q7Z602 305 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 PRSS35Q8N3Z0 413 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 MINDY2Q8NBR6 621 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 NUP37Q8NFH4 326 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 IL17RDQ8NFM7 739 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 RORBQ92753 470 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF799Q96GE5 643 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 SOX7Q9BT81 388 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 ESRP2Q9H6T0 727 aaKnown RBP9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 PLEKHF2Q9H8W4 249 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 INPP5EQ9NRR6 644 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 ACOXLQ9NUZ1 547 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 STARD10Q9Y365 291 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 PCDHGB1Q9Y5G3 927 aa9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 SIRT4Q9Y6E7 314 aaPredicted RBP9.19□□□□□ -0.94
NPIPB3-210ENST00000542817 TMEM129A0AVI4 362 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 METTL15A6NJ78 407 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 PHYHO14832 338 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 CASKO14936 926 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 PTHP01270 115 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 IGLV3-1P01715 115 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 CD3EP07766 207 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 H2BFMP0C1H6 154 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 COX6B1P14854 86 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 ATP6V1B1P15313 513 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 CCNOP22674 350 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 APLNRP35414 380 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 THBS4P35443 961 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 CX3CR1P49238 355 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 MMP16P51512 607 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 BCAP31P51572 246 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 CDH15P55291 814 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF121P58317 390 aaPredicted RBP9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 PSMA6P60900 246 aaKnown RBP9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 GRB2P62993 217 aaKnown RBP9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 TNK1Q13470 666 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 TBC1D28Q2M2D7 210 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF672Q499Z4 452 aaPredicted RBP9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 FDX2Q6P4F2 183 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 DRAM2Q6UX65 266 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF704Q6ZNC4 412 aaPredicted RBP9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 DCDC5Q6ZRR9 648 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 KRT77Q7Z794 578 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 SYS1Q8N2H4 156 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 NANOGP1Q8N7R0 232 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 RPS4Y2Q8TD47 263 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 SPRYD4Q8WW59 207 aaPredicted RBP9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 IPCEF1Q8WWN9 437 aaPredicted RBP9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 IGFBPL1Q8WX77 278 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 C14orf79Q96F83 325 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 MARS2Q96GW9 593 aaKnown RBP9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 C4orf36Q96KX1 117 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 DCLRE1CQ96SD1 692 aaKnown RBP9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 MROQ9BYG7 248 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 NGBQ9NPG2 151 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 GRIP1Q9Y3R0 1128 aa9.18□□□□□ -0.94
NPIPB3-210ENST00000542817 RNF115Q9Y4L5 304 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms