RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SNAI3Q3KNW1 292 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 GID4Q8IVV7 300 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 ZNF786Q8N393 782 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 FAM81AQ8TBF8 368 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 THEM6Q8WUY1 208 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 UBE2FQ969M7 185 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 CYSLTR2Q9NS75 346 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 HAO2Q9NYQ3 351 aa19.36■□□□□ 0.69
SFSWAP-204ENST00000535399 PLSCR5A0PG75 271 aa19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 ERICH4A6NGS2 130 aa19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 VWC2LB2RUY7 222 aa19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 SPRY3O43610 288 aa19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 IGHV1-46P01743 117 aa19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 SLC2A1P11166 492 aa19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 CARTPTQ16568 116 aa19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 OR2T2Q6IF00 324 aa19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 Q6ZR03 302 aa19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 ZNF283Q8N7M2 679 aa19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 TRUB1Q8WWH5 349 aaKnown RBP19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 ZNF582Q96NG8 517 aaPredicted RBP19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 CNN2Q99439 309 aaKnown RBP19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 MSL2Q9HCI7 577 aa19.35■□□□□ 0.69
SFSWAP-204ENST00000535399 LYNX1G3V0Z9 82 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 NDUFS8O00217 210 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 ADH4P08319 380 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 H2BFMP0C1H6 154 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 LYNX1P0DP58 116 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 SLC25A16P16260 332 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 HTR1FP30939 366 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 CX3CR1P49238 355 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 CCL8P80075 99 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 MALLQ13021 153 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 CDK5R2Q13319 367 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 GK2Q14410 553 aaPredicted RBP19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 TSTQ16762 297 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 PRSS45Q7RTY3 260 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 MAPK1IP1LQ8NDC0 245 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 SMR3AQ99954 134 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 ADGRL4Q9HBW9 690 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 IMPAD1Q9NX62 359 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 DNAJC27Q9NZQ0 273 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 LAMP5Q9UJQ1 280 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 COPS3Q9UNS2 423 aa19.34■□□□□ 0.69
SFSWAP-204ENST00000535399 DLGAP1O14490 977 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 COL8A2P25067 703 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 HSD11B1P28845 292 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 MRPS11P82912 194 aaKnown RBP19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 TRIP10Q15642 601 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 ZMAT1Q5H9K5 638 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 FAM209AQ5JX71 171 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 GLYATL3Q5SZD4 288 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 OR5AS1Q8N127 324 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 RDH5Q92781 318 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 YIPF5Q969M3 257 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 GSX1Q9H4S2 264 aaPredicted RBP19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 WARS2Q9UGM6 360 aaKnown RBP19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 ZDHHC8Q9ULC8 765 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 CSPG4Q6UVK1 2322 aa19.33■□□□□ 0.68
SFSWAP-204ENST00000535399 IQCF6A8MYZ5 107 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 PRR32B1ATL7 298 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 APOC1P02654 83 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 GIFP27352 417 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 NR4A2P43354 598 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 PRSS12P56730 875 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 ZNF121P58317 390 aaPredicted RBP19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 SNRPGP62308 76 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 ELF3P78545 371 aaPredicted RBP19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 ZNF92Q03936 586 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 RIN1Q13671 783 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 LPCAT4Q643R3 524 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 LRRN1Q6UXK5 716 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 BIVMQ86UB2 503 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 PIMREGQ9BSJ6 248 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 N6AMT1Q9Y5N5 214 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 GMPPBQ9Y5P6 360 aa19.32■□□□□ 0.68
SFSWAP-204ENST00000535399 LILRA1O75019 489 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 RP2O75695 350 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 CD55P08174 381 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 SBK2P0C263 348 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 SELEP16581 610 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 PEX2P28328 305 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 SLC25A30Q5SVS4 291 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 PGAP1Q75T13 922 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 SLC35F2Q8IXU6 374 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 RFLNBQ8N5W9 214 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 OR8G5Q8NG78 346 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 OR2AE1Q8NHA4 323 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 RDH12Q96NR8 316 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 DIRC2Q96SL1 478 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 REPIN1Q9BWE0 567 aaKnown RBP19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 BPESC1Q9GZL8 116 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 DECR2Q9NUI1 292 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 FAM118AQ9NWS6 357 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 TMEM14AQ9Y6G1 99 aa19.31■□□□□ 0.68
SFSWAP-204ENST00000535399 ZANQ9Y493 2812 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 ANXA2P07355 339 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 ACHEP22303 614 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 ROM1Q03395 351 aa19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 LOXL1Q08397 574 aaPredicted RBP19.3■□□□□ 0.68
SFSWAP-204ENST00000535399 TMED1Q13445 227 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms