RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 GAL3ST1Q99999 423 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 IFT27Q9BW83 186 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 NMNAT2Q9BZQ4 307 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 RERGLQ9H628 205 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 MAGIXQ9H6Y5 334 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 PATZ1Q9HBE1 687 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 DDX28Q9NUL7 540 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 TMCC3Q9ULS5 477 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 CDH10Q9Y6N8 788 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 V9GYQ6 96 aa8.18□□□□□ -1.1
TMEM39A-210ENST00000490099 LOC105371242A0A075B767 164 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 H0YHG0 523 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 TRAPPC2LH3BP13 241 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 MLNRO43193 412 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 FOXH1O75593 365 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 GASTP01350 101 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 WNT2P09544 360 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 SBK2P0C263 348 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 ADRA2CP18825 462 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 RBMXP38159 391 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 PMELP40967 661 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 COMPP49747 757 aaPredicted RBP8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 SLC25A1P53007 311 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 HILS1P60008 231 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 BTG1P62324 171 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 RELBQ01201 579 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 SCGB2A2Q13296 93 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 FLOT2Q14254 428 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 ZMYND11Q15326 602 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 TEX30Q5JUR7 227 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 C1orf146Q5VVC0 180 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 OR2T2Q6IF00 324 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 CD300LDQ6UXZ3 194 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 NAA40Q86UY6 237 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 JAZF1Q86VZ6 243 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 SPICQ8N5J4 248 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 CELF2-AS1Q8N7Q2 184 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 OR8D4Q8NGM9 314 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 NANPQ8TBE9 248 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 ITLN1Q8WWA0 313 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 ZNRF4Q8WWF5 429 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 DVL3Q92997 716 aaPredicted RBP8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 CLPTM1LQ96KA5 538 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 MEGF10Q96KG7 1140 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 LRGUKQ96M69 825 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 ZNF582Q96NG8 517 aaPredicted RBP8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 RBM4Q9BWF3 364 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 EGLN3Q9H6Z9 239 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 TMEM165Q9HC07 324 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 RPRD1BQ9NQG5 326 aaKnown RBP8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 MMP26Q9NRE1 261 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 PPP1R3CQ9UQK1 317 aa8.17□□□□□ -1.1
TMEM39A-210ENST00000490099 TENM1Q9UKZ4 2725 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 TNFRSF11BO00300 401 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 PSKH1P11801 424 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 SELEP16581 610 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 ZNF12P17014 697 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 HOXB6P17509 224 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 EPHA1P21709 976 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 NOS3P29474 1203 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 MDH2P40926 338 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 PAX8Q06710 450 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 GK2Q14410 553 aaPredicted RBP8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 MICAQ29983 383 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 SLC35F1Q5T1Q4 408 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 DCAF12L2Q5VW00 463 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 CYP2R1Q6VVX0 501 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 DHFR2Q86XF0 187 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 KLHL36Q8N4N3 616 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 SDR9C7Q8NEX9 313 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 OR9Q2Q8NGE9 314 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 OR2T4Q8NH00 348 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 Q8TCH9 128 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 FAM216AQ8WUB2 273 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 UTP4Q969X6 686 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 PITX2Q99697 317 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 ATF6BQ99941 703 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 DGCR6LQ9BY27 220 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 PLA2G12AQ9BZM1 189 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 C7orf69Q9H7B7 122 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 VNN3Q9NY84 501 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 PTTG3PQ9NZH4 202 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 BAIAP2Q9UQB8 552 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 POMPQ9Y244 141 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 POLR1DQ9Y2S0 133 aa8.16□□□□□ -1.1
TMEM39A-210ENST00000490099 TMEM89A2RUT3 159 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 F5H5K5 113 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 H0YL77 283 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 ACOT8O14734 319 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 PPIAL4GP0DN37 164 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 PYCR1P32322 319 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 CD200P41217 278 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 CENPAP49450 140 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 SRP9P49458 86 aaKnown RBP8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 RAD23AP54725 363 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 SEC61A1P61619 476 aaKnown RBP8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 LCN2P80188 198 aa8.15□□□□□ -1.1
TMEM39A-210ENST00000490099 MAB21L1Q13394 359 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms