RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	TAF13	Q15543	124 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	ELFN2	Q5R3F8	820 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	KCTD18	Q6PI47	426 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	SLC22A25	Q6T423	547 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	LRRN1	Q6UXK5	716 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	VASH1	Q7L8A9	365 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	SSX6	Q7RTT6	188 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	KRT77	Q7Z794	578 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	OR10S1	Q8NGN2	331 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	SNX33	Q8WV41	574 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	HDHD2	Q9H0R4	259 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	BARX1	Q9HBU1	254 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	YAE1D1	Q9NRH1	226 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	INPP5E	Q9NRR6	644 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	ERVK13-1	Q9NX77	482 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	SLCO1C1	Q9NYB5	712 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	PRR32	B1ATL7	298 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	ZNF878	C9JN71	531 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991		M0R1B8	84 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	CD8A	P01732	235 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	IGHV4-39	P01824	125 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	MT-ND2	P03891	347 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	CELA3B	P08861	270 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	H2BFM	P0C1H6	154 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	CD40	P25942	277 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	APEX1	P27695	318 aa	Known RBP	11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	APLNR	P35414	380 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	ETV1	P50549	477 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	CDH15	P55291	814 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	GALE	Q14376	348 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	DTX2	Q86UW9	622 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	PHC2	Q8IXK0	858 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	FBXL14	Q8N1E6	418 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	OR1F12	Q8NHA8	337 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	RNF133	Q8WVZ7	376 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	MRPL48	Q96GC5	212 aa	Known RBP	11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	MS4A3	Q96HJ5	214 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	OR8B4	Q96RC9	309 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	NR1H4	Q96RI1	486 aa	Predicted RBP	11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	ATF6B	Q99941	703 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	DHRS9	Q9BPW9	319 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	ALG8	Q9BVK2	526 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	PNRC2	Q9NPJ4	139 aa	Known RBP	11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	CLEC2D	Q9UHP7	191 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	FBXL3	Q9UKT7	428 aa		11.28	□□□□□ -0.6
NR1H3-223	ENST00000486991	OR6C6	A6NF89	314 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	RNF212B	A8MTL3	300 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	SYNGR3	O43761	229 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	PTH	P01270	115 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	SERPINA5	P05154	406 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	KRT8	P05787	483 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	LIMS3	P0CW19	117 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	LIMS4	P0CW20	117 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF14	P17017	642 aa	Predicted RBP	11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	HSD11B1	P28845	292 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	GDI2	P50395	445 aa	Known RBP	11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	EGR3	Q06889	387 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	KCTD21	Q4G0X4	260 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	TP53I3	Q53FA7	332 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF544	Q6NX49	715 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	PLEKHG7	Q6ZR37	379 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	PRSS48	Q7RTY5	328 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	FAM220A	Q7Z4H9	259 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	MYPOP	Q86VE0	399 aa	Predicted RBP	11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF584	Q8IVC4	421 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	KLHL36	Q8N4N3	616 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	YIPF7	Q8N8F6	280 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	CPEB3	Q8NE35	698 aa	Known RBP	11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	SLC7A6	Q92536	515 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF75A	Q96N20	296 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	MYCBP	Q99417	103 aa	Predicted RBP	11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	COQ7	Q99807	217 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	KCNS3	Q9BQ31	491 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	JAM3	Q9BX67	310 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	MRO	Q9BYG7	248 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	ELOVL3	Q9HB03	270 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	GNG8	Q9UK08	70 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	LRP12	Q9Y561	859 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	SNX5	Q9Y5X3	404 aa		11.27	□□□□□ -0.61
NR1H3-223	ENST00000486991	IGHV1-18	A0A0C4DH31	117 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	C5orf49	A4QMS7	147 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	METTL15	A6NJ78	407 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991		E7EQL1	145 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991		F5H5K5	113 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991		J3QLW9	94 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	MYL12B	O14950	172 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	GPRIN2	O60269	458 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	IGKV3-15	P01624	115 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	HTR1A	P08908	422 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	DBH	P09172	617 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	COX5B	P10606	129 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	CCL2	P13500	99 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF19	P17023	458 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	CCNO	P22674	350 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	STOM	P27105	288 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	TTK	P33981	857 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	OPRL1	P41146	370 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	FABP6	P51161	128 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	PRKX	P51817	358 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 122 ms