RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	RFPL4B	Q6ZWI9	263 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	DPY19L4	Q7Z388	723 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	DCXR	Q7Z4W1	244 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	TGIF2LY	Q8IUE0	185 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	KRTAP1-3	Q8IUG1	177 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ENTHD1	Q8IYW4	607 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF101	Q8IZC7	436 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF786	Q8N393	782 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	DHRSX	Q8N5I4	330 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	TCEANC	Q8N8B7	351 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	CYB561A3	Q8NBI2	242 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF555	Q8NEP9	628 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	CSNK2A3	Q8NEV1	391 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR6K6	Q8NGW6	343 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	KLF14	Q8TD94	323 aa	Predicted RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	SNX33	Q8WV41	574 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	THRSP	Q92748	146 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	TFAP2C	Q92754	450 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	HPS1	Q92902	700 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	MS4A3	Q96HJ5	214 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	DMRTB1	Q96MA1	342 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF582	Q96NG8	517 aa	Predicted RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	TECTB	Q96PL2	329 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR8B4	Q96RC9	309 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	MBOAT4	Q96T53	435 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	SLC29A1	Q99808	456 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ADI1	Q9BV57	179 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ANKRD60	Q9BZ19	345 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	EMC7	Q9NPA0	242 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	TVP23B	Q9NYZ1	205 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	IL19	Q9UHD0	177 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	LAMP3	Q9UQV4	416 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	RPL36	Q9Y3U8	105 aa	Known RBP	4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	GMPPB	Q9Y5P6	360 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZAN	Q9Y493	2812 aa		4.36	□□□□□ -1.71
HDAC6-223	ENST00000480525	WNK2	Q9Y3S1	2297 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	HIVEP2	P31629	2446 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525		A0A1W2PR80	420 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	SAC3D1	A6NKF1	404 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	FAM183A	A6NL82	134 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	VWC2L	B2RUY7	222 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF670-ZNF695	F2Z2N8	137 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	MITF	O75030	526 aa	Predicted RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	SRSF10	O75494	262 aa	Known RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	MTRF1	O75570	445 aa	Known RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	MPZL1	O95297	269 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	CD1A	P06126	327 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	IGFBP1	P08833	259 aa	Predicted RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	ACAA1	P09110	424 aa	Predicted RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	SPARC	P09486	303 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	TACSTD2	P09758	323 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	CCDC159	P0C7I6	412 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	CLU	P10909	449 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	DBT	P11182	482 aa	Known RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	TNFRSF1A	P19438	455 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	PEX2	P28328	305 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	HSD11B1	P28845	292 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	PYCR1	P32322	319 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	CAPG	P40121	348 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	CD200	P41217	278 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	CRYBB2	P43320	205 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	TGM4	P49221	684 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	TMEM33	P57088	247 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	TUBA1B	P68363	451 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	TUBA4A	P68366	448 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	BDH1	Q02338	343 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	LOXL1	Q08397	574 aa	Predicted RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	MED21	Q13503	144 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	SNTB1	Q13884	538 aa	Known RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	GK2	Q14410	553 aa	Predicted RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	MAD2L1BP	Q15013	274 aa	Predicted RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	FAM76B	Q5HYJ3	339 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	TMEM236	Q5W0B7	351 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	TUBA1A	Q71U36	451 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	ERI1	Q8IV48	349 aa	Known RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	C8orf59	Q8N0T1	100 aa	Predicted RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	IQCF1	Q8N6M8	205 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	ACBD7	Q8N6N7	88 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF511	Q8NB15	262 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR8G5	Q8NG78	346 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR9Q1	Q8NGQ5	310 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR1J1	Q8NGS3	322 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR6N2	Q8NGY6	317 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR13G1	Q8NGZ3	307 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	AKR7L	Q8NHP1	331 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	ABHD4	Q8TB40	342 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	FAM81A	Q8TBF8	368 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525		Q8TCH9	128 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	RPS4Y2	Q8TD47	263 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNRF4	Q8WWF5	429 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	C1orf159	Q96HA4	380 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	SLC30A2	Q9BRI3	323 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	COPS4	Q9BT78	406 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	TMUB1	Q9BVT8	246 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	CACNG6	Q9BXT2	260 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	MRPL37	Q9BZE1	423 aa	Known RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	RIBC2	Q9H4K1	309 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	CHODL	Q9H9P2	273 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms