RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 VDAC2P45880 294 aaPredicted RBP5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 GPR1P46091 355 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 GPR6P46095 362 aaPredicted RBP5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 RORCP51449 518 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 STX17P56962 302 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 ZNF92Q03936 586 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 C1orf100Q5SVJ3 147 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 C1orf146Q5VVC0 180 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 CDC20BQ86Y33 519 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 MYOCDQ8IZQ8 938 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 TMEM252Q8N6L7 170 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 WDSUB1Q8N9V3 476 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 LRRC20Q8TCA0 184 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 TCP10LQ8TDR4 215 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 ACOT11Q8WXI4 607 aaPredicted RBP5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 TMEM54Q969K7 222 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 ISOC2Q96AB3 205 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 TSSK3Q96PN8 268 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 HES7Q9BYE0 225 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 NAA50Q9GZZ1 169 aaKnown RBP5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 ZC4H2Q9NQZ6 224 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 QPCTLQ9NXS2 382 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 DCDC2Q9UHG0 476 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 PYCARDQ9ULZ3 195 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 FLVCR2Q9UPI3 526 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 SIP14410 1827 aa5.53□□□□□ -1.52
GAPVD1-217ENST00000479511 ASTN1O14525 1302 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 TRAV6A0A075B6T7 132 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 A0A087WWV3 80 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 IGKV1D-13A0A0B4J2D9 117 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 ZNF816-ZNF321PA0A0X1KG74 233 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 ZNF726A6NNF4 738 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 SLC37A4O43826 429 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 ZNF354AO60765 605 aaPredicted RBP5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 APOA1P02647 267 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 SEMG1P04279 462 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 IGKV1-13P0DP09 117 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 GDF1P27539 372 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 MDH2P40926 338 aaKnown RBP5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 RPL34P49207 117 aaKnown RBP5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 CCL23P55773 120 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 ATP6V0D1P61421 351 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 YWHAEP62258 255 aaKnown RBP5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 SLC25A11Q02978 314 aaKnown RBP5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 XRCC4Q13426 336 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 PGGHGQ32M88 737 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 TRMT5Q32P41 509 aaKnown RBP5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 TCEAL5Q5H9L2 206 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 TFAP2EQ6VUC0 442 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 ZNF620Q6ZNG0 422 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 ZNF677Q86XU0 584 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 OR8K1Q8NGG5 319 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 OR9G1Q8NH87 305 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 ZNF599Q96NL3 588 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 ISG20L2Q9H9L3 353 aaKnown RBP5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 TREM1Q9NP99 234 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 ABCD2Q9UBJ2 740 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 KLK13Q9UKR3 277 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 RBMX2Q9Y388 322 aaKnown RBP5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 SCN10AQ9Y5Y9 1956 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 FLNBO75369 2602 aaKnown RBP5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 LCTP09848 1927 aa5.52□□□□□ -1.53
GAPVD1-217ENST00000479511 TRIOO75962 3097 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 UQCRHLA0A096LP55 91 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 GSTTP1A0A1W2PQM5 241 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 CETN3O15182 167 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 CALUO43852 315 aaPredicted RBP5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 KLRC4O43908 158 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 GMDSO60547 372 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 DCNP07585 359 aaKnown RBP5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 UQCRHP07919 91 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 GLP1RP43220 463 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 SUB1P53999 127 aaKnown RBP eCLIP5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 CSNK1G2P78368 415 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 ZNF33AQ06730 810 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 SYCP1Q15431 976 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 ATP6AP1Q15904 470 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 KRT71Q3SY84 523 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 GATSQ8NAP1 163 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 COL21A1Q96P44 957 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 RIOK2Q9BVS4 552 aaKnown RBP5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 TIPINQ9BVW5 301 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 HINT2Q9BX68 163 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 SIAEQ9HAT2 523 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 TXLNGQ9NUQ3 528 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 EXD2Q9NVH0 621 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 APOBEC3BQ9UH17 382 aaKnown RBP5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 GOLT1BQ9Y3E0 138 aa5.51□□□□□ -1.53
GAPVD1-217ENST00000479511 HCFC1P51610 2035 aa5.5□□□□□ -1.53
GAPVD1-217ENST00000479511 A0A0J9YWU9 116 aa5.5□□□□□ -1.53
GAPVD1-217ENST00000479511 ZNF780AO75290 641 aaPredicted RBP5.5□□□□□ -1.53
GAPVD1-217ENST00000479511 CCL2P13500 99 aa5.5□□□□□ -1.53
GAPVD1-217ENST00000479511 ZP3P21754 424 aa5.5□□□□□ -1.53
GAPVD1-217ENST00000479511 CASP1P29466 404 aa5.5□□□□□ -1.53
GAPVD1-217ENST00000479511 RFC3P40938 356 aa5.5□□□□□ -1.53
GAPVD1-217ENST00000479511 OR3A4PP47883 348 aa5.5□□□□□ -1.53
GAPVD1-217ENST00000479511 CCR8P51685 355 aa5.5□□□□□ -1.53
GAPVD1-217ENST00000479511 SNRPFP62306 86 aaKnown RBP5.5□□□□□ -1.53
GAPVD1-217ENST00000479511 SP4Q02446 784 aa5.5□□□□□ -1.53
GAPVD1-217ENST00000479511 SPA17Q15506 151 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms