RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 CD163L1Q9NR16 1453 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 MYOM1P52179 1685 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 RP1L1Q8IWN7 2480 aaPredicted RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 NAV1Q8NEY1 1877 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 COL1A1P02452 1464 aaPredicted RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 LANCL1O43813 399 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 NME1P15531 152 aaKnown RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 TEAD1P28347 426 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 WASP42768 502 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 CYB561P49447 251 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 PNRC1Q12796 327 aaPredicted RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 HIST3H3Q16695 136 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 DUSP28Q4G0W2 176 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 GOLGA7Q7Z5G4 137 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 CLEC10AQ8IUN9 316 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 ZNRF1Q8ND25 227 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 ZNF835Q9Y2P0 537 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 CACNA1SQ13698 1873 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 MDC1Q14676 2089 aaKnown RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 A8MT66 165 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 B4DEV8 164 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 UPK1AO00322 258 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 POP7O75817 140 aaKnown RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 TRGC2P03986 189 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 IL1R2P27930 398 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 CXCL12P48061 93 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 YPEL5P62699 121 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 MEF2CQ06413 473 aaPredicted RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 PAFAH1B3Q15102 231 aaKnown RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 PMVKQ15126 192 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 PELI3Q8N2H9 469 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 ACVR1CQ8NER5 493 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 OR52N4Q8NGI2 321 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 OR2T35Q8NGX2 323 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 NUDCD2Q8WVJ2 157 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 MS4A10Q96PG2 267 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 FCRL5Q96RD9 977 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 RANBP9Q96S59 729 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 RAB33BQ9H082 229 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 GEMIN7Q9H840 131 aaKnown RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 GLRX2Q9NS18 164 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 MYO5AQ9Y4I1 1855 aaKnown RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 TRIP12Q14669 1992 aaPredicted RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 CNTNAP5Q8WYK1 1306 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 TMEM250H0YL14 139 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 LIPFP07098 398 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 GJA5P36382 358 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 SLC6A11P48066 632 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 SHC2P98077 582 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 MARC2Q969Z3 335 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 ADAT3Q96EY9 351 aaPredicted RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 GPA33Q99795 319 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 PBOV1Q9GZY1 135 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 CHST7Q9NS84 486 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 TMEM59LQ9UK28 342 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 DICER1Q9UPY3 1922 aaKnown RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 SERINC4A6NH21 518 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 NEURL1O76050 574 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 C4BPAP04003 597 aaKnown RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 F13BP05160 661 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 LGALS3P17931 250 aaKnown RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 GABRB1P18505 474 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 AGERQ15109 404 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 LEMD1Q68G75 181 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 OR2G3Q8NGZ4 309 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 ZFAND2BQ8WV99 257 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 DDB2Q92466 427 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 P2RY11Q96G91 374 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 NRIP2Q9BQI9 281 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 LPAR5Q9H1C0 372 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 ZNF665Q9H7R5 613 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 DNAJC15Q9Y5T4 150 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 SOX21Q9Y651 276 aaPredicted RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 SCN5AQ14524 2016 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 TRBV11-1A0A0K0K1C0 115 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 F2RL2O00254 374 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 LYRM1O43325 122 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 OR7C1O76099 320 aaPredicted RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 SEMA4FO95754 770 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 FCARP24071 287 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 ETV3P41162 512 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 SOX2P48431 317 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 ARHGAP8P85298 464 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 CXCL9Q07325 125 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 GPR18Q14330 331 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 DOK3Q7L591 496 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 ANKRD13BQ86YJ7 626 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 PDPNQ86YL7 162 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 ZNF516Q92618 1163 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 GHSRQ92847 366 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 TMUB1Q9BVT8 246 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 TGIF2Q9GZN2 237 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 PPIL3Q9H2H8 161 aaKnown RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 PARLQ9H300 379 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 YAE1D1Q9NRH1 226 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 RHCGQ9UBD6 479 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 TUBD1Q9UJT1 453 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 PRRC2BQ5JSZ5 2229 aaKnown RBP4.97□□□□□ -1.61
USF3-202ENST00000478658 UBE2L5PA0A1B0GUS4 154 aa4.97□□□□□ -1.61
USF3-202ENST00000478658 EIF4E2O60573 245 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms