RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 LCATP04180 440 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 WNT2P09544 360 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 SELEP16581 610 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 RPL13AP3Q6NVV1 102 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 DHFR2Q86XF0 187 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 LNX2Q8N448 690 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 KLHL36Q8N4N3 616 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 TEX29Q8N6K0 151 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 AQP11Q8NBQ7 271 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 DEFB108BQ8NET1 73 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 OR52L1Q8NGH7 329 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 ZNF418Q8TF45 676 aaPredicted RBP17.42■□□□□ 0.38
SDC1-205ENST00000447124 SLCO4A1Q96BD0 722 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 TSSK6Q9BXA6 273 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 MAGIXQ9H6Y5 334 aa17.42■□□□□ 0.38
SDC1-205ENST00000447124 ZNF823P16415 610 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 HILS1P60008 231 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 MAB21L1Q13394 359 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 MICAQ29983 383 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 FAM201AQ5SY85 155 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 USP43Q70EL4 1123 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 MOGAT3Q86VF5 341 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 ARHGAP24Q8N264 748 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 ZNF511Q8NB15 262 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 PROKR2Q8NFJ6 384 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 OR9Q1Q8NGQ5 310 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 RBM4Q9BWF3 364 aaKnown RBP17.41■□□□□ 0.38
SDC1-205ENST00000447124 HCAR1Q9BXC0 346 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 KCNG2Q9UJ96 466 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 U3KQV3 271 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 NBEAL1Q6ZS30 2694 aa17.41■□□□□ 0.38
SDC1-205ENST00000447124 CEACAM18A8MTB9 384 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 ZNF12P17014 697 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 MDH2P40926 338 aaKnown RBP17.4■□□□□ 0.38
SDC1-205ENST00000447124 SRP9P49458 86 aaKnown RBP17.4■□□□□ 0.38
SDC1-205ENST00000447124 TPTEP56180 551 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 SCGB2A2Q13296 93 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 OR2T5Q6IEZ7 315 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 OR2T4Q8NH00 348 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 OR2T29Q8NH02 315 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 ZFAND2BQ8WV99 257 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 DVL3Q92997 716 aaPredicted RBP17.4■□□□□ 0.38
SDC1-205ENST00000447124 CLPTM1LQ96KA5 538 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 SLC6A7Q99884 636 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 DGCR6LQ9BY27 220 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 NMNAT2Q9BZQ4 307 aa17.4■□□□□ 0.38
SDC1-205ENST00000447124 A8MXK9 166 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 IFNL4K9M1U5 179 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 M0R135 149 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 SOX14O95416 240 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 FAM107AO95990 144 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 GYPBP06028 91 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 CLUP10909 449 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 OTX1P32242 354 aaPredicted RBP17.39■□□□□ 0.37
SDC1-205ENST00000447124 ZNF154Q13106 437 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 CRMP1Q14194 572 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 PCK2Q16822 640 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 SNAI3Q3KNW1 292 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 C22orf15Q8WYQ4 148 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 ZNF799Q96GE5 643 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 MUC13Q9H3R2 512 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 DDX28Q9NUL7 540 aaKnown RBP17.39■□□□□ 0.37
SDC1-205ENST00000447124 TBC1D23Q9NUY8 699 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 ARMC1Q9NVT9 282 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 TAS2R1Q9NYW7 299 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 SAMHD1Q9Y3Z3 626 aaKnown RBP17.39■□□□□ 0.37
SDC1-205ENST00000447124 INSIG2Q9Y5U4 225 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 TENM1Q9UKZ4 2725 aa17.39■□□□□ 0.37
SDC1-205ENST00000447124 CALB2P22676 271 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 SLC25A1P53007 311 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 PAX2Q02962 417 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 ZNF92Q03936 586 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 ZNF181Q2M3W8 571 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 TUSC1Q2TAM9 212 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 KLF17Q5JT82 389 aaPredicted RBP17.38■□□□□ 0.37
SDC1-205ENST00000447124 PGAP1Q75T13 922 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 DCXRQ7Z4W1 244 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 ZDHHC22Q8N966 263 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 CCDC197Q8NCU1 140 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 NIPSNAP1Q9BPW8 284 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 TMEM246Q9BRR3 403 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 REEP1Q9H902 201 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 ESM1Q9NQ30 184 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 COMMD3-BMI1R4GMX3 469 aa17.38■□□□□ 0.37
SDC1-205ENST00000447124 DOCK11Q5JSL3 2073 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 CD300LBA8K4G0 201 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 ZNF593O00488 134 aaPredicted RBP17.37■□□□□ 0.37
SDC1-205ENST00000447124 ACOT8O14734 319 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 SPI1P17947 270 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 GATA4P43694 442 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 RAD23AP54725 363 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 HOXA4Q00056 320 aaPredicted RBP17.37■□□□□ 0.37
SDC1-205ENST00000447124 PAX8Q06710 450 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 MALLQ13021 153 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 FAM98BQ52LJ0 330 aaKnown RBP17.37■□□□□ 0.37
SDC1-205ENST00000447124 LINC01590Q5TEZ4 76 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 MUC20Q8N307 709 aaPredicted RBP17.37■□□□□ 0.37
SDC1-205ENST00000447124 OR2AE1Q8NHA4 323 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 FAM216AQ8WUB2 273 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 SPTSSAQ969W0 71 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms