RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 ZNF799Q96GE5 643 aa14.86□□□□□ -0.03
NUP50-208ENST00000430547 MAP6Q96JE9 813 aa14.86□□□□□ -0.03
NUP50-208ENST00000430547 DDOQ99489 341 aa14.86□□□□□ -0.03
NUP50-208ENST00000430547 FEVQ99581 238 aa14.86□□□□□ -0.03
NUP50-208ENST00000430547 NIPSNAP1Q9BPW8 284 aa14.86□□□□□ -0.03
NUP50-208ENST00000430547 COPS4Q9BT78 406 aa14.86□□□□□ -0.03
NUP50-208ENST00000430547 RBM4Q9BWF3 364 aaKnown RBP14.86□□□□□ -0.03
NUP50-208ENST00000430547 YY1AP1Q9H869 796 aa14.86□□□□□ -0.03
NUP50-208ENST00000430547 PNRC2Q9NPJ4 139 aaKnown RBP14.86□□□□□ -0.03
NUP50-208ENST00000430547 METRNQ9UJH8 293 aa14.86□□□□□ -0.03
NUP50-208ENST00000430547 ARRDC5A6NEK1 342 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 IFNL4K9M1U5 179 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 TCF21O43680 179 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 SPI1P17947 270 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 SLC25A1P53007 311 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 GK2Q14410 553 aaPredicted RBP14.85□□□□□ -0.03
NUP50-208ENST00000430547 RSPO1Q2MKA7 263 aaPredicted RBP14.85□□□□□ -0.03
NUP50-208ENST00000430547 KRTAP27-1Q3LI81 207 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 ZNF362Q5T0B9 420 aaPredicted RBP14.85□□□□□ -0.03
NUP50-208ENST00000430547 DCAF12L2Q5VW00 463 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 CD300LDQ6UXZ3 194 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 COLCA1Q6ZS62 124 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 PGAP1Q75T13 922 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 OTULINQ96BN8 352 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 METTL17Q9H7H0 456 aaPredicted RBP14.85□□□□□ -0.03
NUP50-208ENST00000430547 ZNF556Q9HAH1 456 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 TMEM100Q9NV29 134 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 DCAF16Q9NXF7 216 aa14.85□□□□□ -0.03
NUP50-208ENST00000430547 PDP1Q9P0J1 537 aaPredicted RBP14.85□□□□□ -0.03
NUP50-208ENST00000430547 IGHV2-70P01814 119 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 PAICSP22234 425 aaKnown RBP14.84□□□□□ -0.03
NUP50-208ENST00000430547 BTG1P62324 171 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 LYPD4Q6UWN0 246 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 NAA40Q86UY6 237 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 ZNF511Q8NB15 262 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 SPRYD4Q8WW59 207 aaPredicted RBP14.84□□□□□ -0.03
NUP50-208ENST00000430547 ZNRF4Q8WWF5 429 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 SLCO4A1Q96BD0 722 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 MEGF10Q96KG7 1140 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 SLC30A2Q9BRI3 323 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 OCEL1Q9H607 264 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 GCM1Q9NP62 436 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 CMC2Q9NRP2 79 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 CENPMQ9NSP4 180 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 DDX28Q9NUL7 540 aaKnown RBP14.84□□□□□ -0.03
NUP50-208ENST00000430547 FAM53CQ9NYF3 392 aa14.84□□□□□ -0.03
NUP50-208ENST00000430547 LRRC30A6NM36 301 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 ZNF878C9JN71 531 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 ZNF593O00488 134 aaPredicted RBP14.83□□□□□ -0.04
NUP50-208ENST00000430547 FOXH1O75593 365 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 DNAJC8O75937 253 aaPredicted RBP14.83□□□□□ -0.04
NUP50-208ENST00000430547 CLUP10909 449 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 GATA3P23771 443 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 POU1F1P28069 291 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 GRK5P34947 590 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 MMP16P51512 607 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 RAD23AP54725 363 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 PRSS12P56730 875 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 LCN2P80188 198 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 TMEM155Q4W5P6 130 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 DRAM2Q6UX65 266 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 MUC20Q8N307 709 aaPredicted RBP14.83□□□□□ -0.04
NUP50-208ENST00000430547 IQCF1Q8N6M8 205 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 OR10S1Q8NGN2 331 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 SLAMF6Q96DU3 332 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 NMNAT2Q9BZQ4 307 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 G6PC2Q9NQR9 355 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 NOP16Q9Y3C1 178 aaKnown RBP14.83□□□□□ -0.04
NUP50-208ENST00000430547 DNHD1Q96M86 4753 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 ARHGAP32A7KAX9 2087 aa14.83□□□□□ -0.04
NUP50-208ENST00000430547 FAM183AA6NL82 134 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 F5H5P2 479 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 H0YL77 283 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 J3QLI3 93 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 MLNRO43193 412 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 MDH2P40926 338 aaKnown RBP14.82□□□□□ -0.04
NUP50-208ENST00000430547 SLC15A1P46059 708 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 CBX1P83916 185 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 HNRNPA0Q13151 305 aaKnown RBP14.82□□□□□ -0.04
NUP50-208ENST00000430547 ZMYND11Q15326 602 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 KRTAP24-1Q3LI83 254 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 C1orf87Q8N0U7 546 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 ZNF420Q8TAQ5 688 aaPredicted RBP14.82□□□□□ -0.04
NUP50-208ENST00000430547 INTS14Q96SY0 518 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 TEX12Q9BXU0 123 aa14.82□□□□□ -0.04
NUP50-208ENST00000430547 IGHV3-64DA0A0J9YX35 117 aa14.81□□□□□ -0.04
NUP50-208ENST00000430547 GGT3PA6NGU5 568 aa14.81□□□□□ -0.04
NUP50-208ENST00000430547 TMEM178BH3BS89 294 aa14.81□□□□□ -0.04
NUP50-208ENST00000430547 HLA-DPB1P04440 258 aa14.81□□□□□ -0.04
NUP50-208ENST00000430547 IRF2P14316 349 aa14.81□□□□□ -0.04
NUP50-208ENST00000430547 HSD11B1P28845 292 aa14.81□□□□□ -0.04
NUP50-208ENST00000430547 OTX1P32242 354 aaPredicted RBP14.81□□□□□ -0.04
NUP50-208ENST00000430547 PRKXP51817 358 aa14.81□□□□□ -0.04
NUP50-208ENST00000430547 GRB2P62993 217 aaKnown RBP14.81□□□□□ -0.04
NUP50-208ENST00000430547 SRSF2Q01130 221 aaKnown RBP14.81□□□□□ -0.04
NUP50-208ENST00000430547 EIF2B1Q14232 305 aaKnown RBP14.81□□□□□ -0.04
NUP50-208ENST00000430547 SNAI3Q3KNW1 292 aa14.81□□□□□ -0.04
NUP50-208ENST00000430547 TEX30Q5JUR7 227 aa14.81□□□□□ -0.04
NUP50-208ENST00000430547 SPATC1Q76KD6 591 aa14.81□□□□□ -0.04
NUP50-208ENST00000430547 TMEM179BQ7Z7N9 219 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms