RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SP6Q3SY56 376 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 PRAMEF5Q5TYX0 476 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 PRAMEF6Q5VXH4 476 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 YRDCQ86U90 279 aaKnown RBP10.94□□□□□ -0.66
UBR4-205ENST00000417040 SOX7Q9BT81 388 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 BCO1Q9HAY6 547 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 TCRBV16S1A1N1A0A5B0 115 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 NUDT19A8MXV4 375 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 PMCHP20382 165 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 CRYBB2P43320 205 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 MMP15P51511 669 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 RNF212Q495C1 297 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 UBAC2Q8NBM4 344 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 SLC39A7Q92504 469 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 MED18Q9BUE0 208 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 SNRPGP15A8MWD9 76 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 FXYD1O00168 92 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 WDR1O75083 606 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 S100A8P05109 93 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 ZNF816Q0VGE8 651 aaPredicted RBP10.93□□□□□ -0.66
UBR4-205ENST00000417040 ZNF718Q3SXZ3 478 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 LYSMD4Q5XG99 296 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 LINC00299Q6ZSB3 139 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 SLC16A12Q6ZSM3 486 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 ZNF429Q86V71 674 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 GINS3Q9BRX5 216 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 KCNK15Q9H427 330 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 FOXJ3Q9UPW0 622 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 UBE2L5PA0A1B0GUS4 154 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 E5RGE8 158 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 CHRM2P08172 466 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 SLC6A12P48065 614 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 DUSP8Q13202 625 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 HES1Q14469 280 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 RSPO2Q6UXX9 243 aaPredicted RBP10.93□□□□□ -0.66
UBR4-205ENST00000417040 ANKRD53Q8N9V6 530 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 ANGPTL6Q8NI99 470 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 LHX4Q969G2 390 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 NMES1Q9C002 83 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 SLC25A19Q9HC21 320 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 PRR13Q9NZ81 148 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 NSG2Q9Y328 171 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 TRAV34A0A0B4J273 112 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 CST7O76096 145 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 CST5P28325 142 aaPredicted RBP10.93□□□□□ -0.66
UBR4-205ENST00000417040 ALKBH6Q3KRA9 238 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 SEZ6L2Q6UXD5 910 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 FAM24BQ8N5W8 94 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 GPR160Q9UJ42 338 aa10.93□□□□□ -0.66
UBR4-205ENST00000417040 LEUTXA8MZ59 168 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 CD1CP29017 333 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 SELENOPP49908 381 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 RBP2P50120 134 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 CLLU1Q5K131 121 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 METRNLQ641Q3 311 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 OR2A2Q6IF42 318 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 SCPEP1Q9HB40 452 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 DECR2Q9NUI1 292 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 TMEM30AQ9NV96 361 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 FGF7P21781 194 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 MOGAT2Q3SYC2 334 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 PLXDC2Q6UX71 529 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 TFAP2EQ6VUC0 442 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 CYHR1Q6ZMK1 362 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 TIPARPQ7Z3E1 657 aaKnown RBP10.92□□□□□ -0.66
UBR4-205ENST00000417040 OR4C5Q8NGB2 326 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 ZNRF4Q8WWF5 429 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 DLL4Q9NR61 685 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 DAPP1Q9UN19 280 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 HCFC2Q9Y5Z7 792 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 MYO5AQ9Y4I1 1855 aaKnown RBP10.92□□□□□ -0.66
UBR4-205ENST00000417040 ZNF732B4DXR9 585 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 SPINT2O43291 252 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 SLC25A4P12235 298 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 VWA2Q5GFL6 755 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 FCRL6Q6DN72 434 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 LAIR1Q6GTX8 287 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 OR2W3Q7Z3T1 314 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 CCL4L1Q8NHW4 92 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 JAM3Q9BX67 310 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 PBX4Q9BYU1 374 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 MMP24Q9Y5R2 645 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 UPK1AO00322 258 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 LY86O95711 162 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 BSGP35613 385 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 RAB13P51153 203 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 RAB1AP62820 205 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 NCMAPQ5T1S8 102 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 TMEM18Q96B42 140 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 MS4A4AQ96JQ5 239 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 HDAC8Q9BY41 377 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 UCK1Q9HA47 277 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 MSL2Q9HCI7 577 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 SUSD2Q9UGT4 822 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 SLC17A4Q9Y2C5 497 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 FAM166BA8MTA8 275 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 CTSLP07711 333 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 ZDHHC11Q9H8X9 412 aa10.92□□□□□ -0.66
UBR4-205ENST00000417040 PDFQ9HBH1 243 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms