RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 AQP11Q8NBQ7 271 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 PLPP7Q8NBV4 271 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 PROKR2Q8NFJ6 384 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 NANPQ8TBE9 248 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 OR2V2Q96R30 315 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 JMJD8Q96S16 334 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 TSSK6Q9BXA6 273 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 POFUT1Q9H488 388 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 EGLN3Q9H6Z9 239 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 METTL17Q9H7H0 456 aaPredicted RBP12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 YY1AP1Q9H869 796 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 SP140LQ9H930 580 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 PATZ1Q9HBE1 687 aaKnown RBP12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 LPAR2Q9HBW0 351 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 DDX28Q9NUL7 540 aaKnown RBP12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 TAS2R1Q9NYW7 299 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 PTTG3PQ9NZH4 202 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 TMEM178BH3BS89 294 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 GPANK1O95872 356 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 APOC1P02654 83 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 LCATP04180 440 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 GATA4P43694 442 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 SLC15A1P46059 708 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 HLXQ14774 488 aaPredicted RBP12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 KRTAP24-1Q3LI83 254 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 OR2T2Q6IF00 324 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 DRAM2Q6UX65 266 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 CFAP77Q6ZQR2 320 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 PGAP1Q75T13 922 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 KLBQ86Z14 1044 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 OR9Q2Q8NGE9 314 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 ITLN1Q8WWA0 313 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 C19orf24Q9BVV8 132 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 RBM4Q9BWF3 364 aaKnown RBP12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 OPA3Q9H6K4 179 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 PNRC2Q9NPJ4 139 aaKnown RBP12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 TBC1D23Q9NUY8 699 aa12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 MRPL22Q9NWU5 206 aaKnown RBP12.26□□□□□ -0.45
NIF3L1-205ENST00000409588 RIIAD1A6NNX1 92 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 M0R135 149 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 GMDSO60547 372 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 CST1P01037 141 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 OTX1P32242 354 aaPredicted RBP12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 SLC6A9P48067 706 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 MZT1Q08AG7 82 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 GK2Q14410 553 aaPredicted RBP12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 C1QL2Q7Z5L3 287 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 LINC00346Q8IVM7 164 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 SPERTQ8NA61 448 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 SLC37A3Q8NCC5 494 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 ZNF799Q96GE5 643 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 MEGF10Q96KG7 1140 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 CHID1Q9BWS9 393 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 NMNAT2Q9BZQ4 307 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 C7orf69Q9H7B7 122 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 UBAP1Q9NZ09 502 aa12.25□□□□□ -0.45
NIF3L1-205ENST00000409588 GNGT2O14610 69 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 ACOT8O14734 319 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 ZNF3P17036 446 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 FPR2P25090 351 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 DDOSTP39656 456 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 ENTPD1P49961 510 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 RAD23AP54725 363 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 DNAL1Q4LDG9 190 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 OTPQ5XKR4 325 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 OR5AS1Q8N127 324 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 GIPC3Q8TF64 312 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 SPRYD4Q8WW59 207 aaPredicted RBP12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 MAP6Q96JE9 813 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 SIGLEC11Q96RL6 698 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 KCNJ15Q99712 375 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 TEX12Q9BXU0 123 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 TMPRSS13Q9BYE2 586 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 PLA2G12AQ9BZM1 189 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 TOR3AQ9H497 397 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 CMC2Q9NRP2 79 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 MIOXQ9UGB7 285 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 LRCH1Q9Y2L9 728 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 U3KQV3 271 aa12.24□□□□□ -0.45
NIF3L1-205ENST00000409588 A8MXK9 166 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 ZNF593O00488 134 aaPredicted RBP12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 GYG2O15488 501 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 HMGN1P05114 100 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 IRF2P14316 349 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 PAICSP22234 425 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 CD200P41217 278 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 GRB2P62993 217 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 ZMYND11Q15326 602 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 TAF13Q15543 124 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 ESCO2Q56NI9 601 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 SPRNQ5BIV9 151 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 SHFQ7M4L6 423 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 TRPM8Q7Z2W7 1104 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 MRPL21Q7Z2W9 205 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 DCXRQ7Z4W1 244 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 CYB561A3Q8NBI2 242 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 OR10G2Q8NGC3 310 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 OR8D4Q8NGM9 314 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 OR11L1Q8NGX0 322 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 295.3 ms