RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 OR4C6Q8NH72 309 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 LYPD6BQ8NI32 183 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 M1APQ8TC57 530 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 WDR34Q96EX3 536 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 ZNF385AQ96PM9 386 aaKnown RBP14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 INTS14Q96SY0 518 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 EFCAB11Q9BUY7 163 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 NKX2-4Q9H2Z4 354 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 DPEP2Q9H4A9 486 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 HAO2Q9NYQ3 351 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 USP36Q9P275 1121 aaKnown RBP14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 KLK13Q9UKR3 277 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 SIGLEC7Q9Y286 467 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 PRUNE2Q8WUY3 3088 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 FAM171A2A8MVW0 826 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 ZNF736B4DX44 427 aaPredicted RBP14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 ATXN7O15265 892 aaPredicted RBP14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 GPRIN2O60269 458 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 STATHP02808 62 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 MMP7P09237 267 aaPredicted RBP14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 GDI1P31150 447 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 NCBP2P52298 156 aaKnown RBP eCLIP14.09□□□□□ -0.151e-6■■□□□ 12
CTDSP1-201ENST00000273062 ACTBP60709 375 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 ACTG1P63261 375 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 CST6Q15828 149 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 ZNF627Q7L945 461 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 LRP11Q86VZ4 500 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 ZNF227Q86WZ6 799 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 ZNF514Q96K75 400 aaPredicted RBP14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 DIRC2Q96SL1 478 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 MENTQ9BUN1 341 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 ULBP3Q9BZM4 244 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 GEMIN2O14893 280 aaKnown RBP14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 OR4A8P0C604 315 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 OR2T7P0C7T2 308 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 HTR2CP28335 458 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 BSGP35613 385 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 LSSP48449 732 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 BTG2P78543 158 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 ARSJQ5FYB0 599 aaPredicted RBP14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 ADAMTSL4Q6UY14 1074 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 TMEM229BQ8NBD8 167 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 OR2T27Q8NH04 317 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 HPSE2Q8WWQ2 592 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 SMIM3Q9BZL3 60 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 SRMSQ9H3Y6 488 aa14.09□□□□□ -0.15
CTDSP1-201ENST00000273062 M0R143 59 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 C8orf89P0DMQ9 161 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 MDKP21741 143 aaPredicted RBP14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 KIR3DL2P43630 455 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 RGS19P49795 217 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 AFF3P51826 1226 aaKnown RBP14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 RAC1P63000 192 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 C2orf76Q3KRA6 126 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 DCAF10Q5QP82 559 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 TMEM268Q5VZI3 342 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 YAF2Q8IY57 180 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 GJD3Q8N144 294 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 FAM174AQ8TBP5 190 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 ZPLD1Q8TCW7 415 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 SFXN5Q8TD22 340 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 OR51B6Q9H340 312 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 KCNJ16Q9NPI9 418 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 COLEC10Q9Y6Z7 277 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 FITM1A5D6W6 292 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 DUXAA6NLW8 204 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 ZNF354AO60765 605 aaPredicted RBP14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 CYB5AP00167 134 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 LINC00614P0C842 121 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 PGA3P0DJD8 388 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 S1PR1P21453 382 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 RBX1P62877 108 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 SRSF5Q13243 272 aaKnown RBP14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 Q499Y3 187 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 RNASE8Q8TDE3 154 aaKnown RBP14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 ZPBPQ9BS86 351 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 MRI1Q9BV20 369 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 SEMA5BQ9P283 1151 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 PADI1Q9ULC6 663 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 ICAM5Q9UMF0 924 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 CACNA1CQ13936 2221 aa14.08□□□□□ -0.16
CTDSP1-201ENST00000273062 FOSL2P15408 326 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 HIST1H1CP16403 213 aaKnown RBP14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 RAB1AP62820 205 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 TGM3Q08188 693 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 CLN3Q13286 438 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 MOGAT2Q3SYC2 334 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 TMEM31Q5JXX7 168 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 NCR3LG1Q68D85 454 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 OR13C9Q8NGT0 318 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 PRAP1Q96NZ9 151 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 AQP10Q96PS8 301 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 RARRES2Q99969 163 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 CDV3Q9UKY7 258 aaKnown RBP14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 KCNK6Q9Y257 313 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 TMED3Q9Y3Q3 217 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 F5P12259 2224 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 EFSO43281 561 aa14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 ERAL1O75616 437 aaKnown RBP14.07□□□□□ -0.16
CTDSP1-201ENST00000273062 MBPP02686 304 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms