RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 FAM206AQ9NX38 181 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 TINAGQ9UJW2 476 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 SPATA2Q9UM82 520 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 DHDHQ9UQ10 334 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 V9GY05 133 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 CSMD1Q96PZ7 3565 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 INTS1Q8N201 2190 aaKnown RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 A0A0G2JK05 382 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 SLC22A20A6NK97 555 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 AHRRA9YTQ3 701 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 H0YC42 278 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 PSMD9O00233 223 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 CTDSP2O14595 271 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 MAGEB4O15481 346 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 ERCC1P07992 297 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 HOXD4P09016 255 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 CLEC2LP0C7M8 214 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 COX5BP10606 129 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 CD37P11049 281 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 PRF1P14222 555 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 KLK2P20151 261 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 CCL1P22362 96 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 RPS27P42677 84 aaKnown RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 DBPQ10586 325 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 ENDOGQ14249 297 aaKnown RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 SGCAQ16586 387 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 KRTCAP3Q53RY4 240 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 SP5Q6BEB4 398 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 DRAM2Q6UX65 266 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 STAC2Q6ZMT1 411 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 LSRQ86X29 649 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 LINC00346Q8IVM7 164 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 ABHD3Q8WU67 409 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 CHPT1Q8WUD6 406 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 TSEN15Q8WW01 171 aaKnown RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 DIRAS2Q96HU8 199 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 ZNF845Q96IR2 970 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 RGCCQ9H4X1 137 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 CRLF2Q9HC73 371 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 PNRC2Q9NPJ4 139 aaKnown RBP11.58□□□□□ -0.56
SLIRP-201ENST00000238688 MALT1Q9UDY8 824 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 SH3BGRL2Q9UJC5 107 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 EMC9Q9Y3B6 208 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 TIMM10BQ9Y5J6 103 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 HCFC1P51610 2035 aa11.58□□□□□ -0.56
SLIRP-201ENST00000238688 LOC390937A0A1W2PQ73 354 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 SHISA3A0PJX4 238 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 FABP12A6NFH5 140 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 ANXA2P2A6NMY6 339 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 IFITM5A6NNB3 132 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 KRT33AO76009 404 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 ALX3O95076 343 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 PNPP00491 289 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 CRHP06850 196 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 ANXA2P07355 339 aaKnown RBP11.57□□□□□ -0.56
SLIRP-201ENST00000238688 RFC3P40938 356 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 EVX1P49640 407 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 IDNKQ5T6J7 187 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 CFAP77Q6ZQR2 320 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 Q6ZSR3 168 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 NCCRP1Q6ZVX7 275 aaPredicted RBP11.57□□□□□ -0.56
SLIRP-201ENST00000238688 DOK3Q7L591 496 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.57□□□□□ -0.56
SLIRP-201ENST00000238688 MRGPRGQ86SM5 289 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 LAX1Q8IWV1 398 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 OR10S1Q8NGN2 331 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 FNDC9Q8TBE3 224 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 ASB5Q8WWX0 329 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 RAB40AQ8WXH6 277 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 ZFP3Q96NJ6 502 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 FOXN4Q96NZ1 517 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 SOSTQ9BQB4 213 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 PBOV1Q9GZY1 135 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 PPIL3Q9H2H8 161 aaKnown RBP11.57□□□□□ -0.56
SLIRP-201ENST00000238688 CALHM2Q9HA72 323 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 ABCB9Q9NP78 766 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 EMC7Q9NPA0 242 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 SLC17A5Q9NRA2 495 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 CYSLTR2Q9NS75 346 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 CLCF1Q9UBD9 225 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 SLC22A13Q9Y226 551 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 FBN2P35556 2912 aa11.57□□□□□ -0.56
SLIRP-201ENST00000238688 MED12LQ86YW9 2145 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 A0A1B0GVI7 797 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 LOC107986453A0A1B0GWG9 222 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 OR6C6A6NF89 314 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 PRSS44E7EML9 344 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 PIN1P1O15428 100 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 SGCEO43556 437 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 SS18L1O75177 396 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-201ENST00000238688 PTTG1O95997 202 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 HOXB1P14653 301 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-201ENST00000238688 GABRA1P14867 456 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 CDAP32320 146 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 THBS2P35442 1172 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 TPTEP56180 551 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 SRYQ05066 204 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 RBPJQ06330 500 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 INSL4Q14641 139 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 CEACAM16Q2WEN9 425 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms