RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CLEC2DQ9UHP7 191 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 CAB39Q9Y376 341 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 LRP12Q9Y561 859 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 LRBAP50851 2863 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 TMEM129A0AVI4 362 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 METTL15A6NJ78 407 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 MAGEB4O15481 346 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 CTAG2O75638 210 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 CD40P25942 277 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 RIDAP52758 137 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 NAAAQ02083 359 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 OR52N1Q8NH53 320 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 SLC7A6Q92536 515 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 DCLRE1CQ96SD1 692 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 ZNF696Q9H7X3 374 aa17.18■□□□□ 0.34
PDLIM2-221ENST00000622702 C5orf49A4QMS7 147 aa17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 DPRXA6NFQ7 191 aa17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 MT-ND2P03891 347 aa17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 DBHP09172 617 aa17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 ZNF35P13682 527 aa17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 KRTAP10-9P60411 292 aa17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 TP53I3Q53FA7 332 aa17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 BEX5Q5H9J7 111 aa17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 TMPRSS11AQ6ZMR5 421 aa17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 KLHL36Q8N4N3 616 aa17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 HEATR1Q9H583 2144 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 ESRP2Q9H6T0 727 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 ERGIC3Q9Y282 383 aa17.17■□□□□ 0.34
PDLIM2-221ENST00000622702 IGHV2OR16-5A0A0B4J2B6 119 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 FAM221AA4D161 298 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 F5H5K5 113 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 M0R135 149 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 ICMTO60725 284 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 APOC1P02654 83 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 TACSTD2P09758 323 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 ACSM4P0C7M7 580 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 CCL2P13500 99 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 HSD11B1P28845 292 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 TPTEP56180 551 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 OR12D2P58182 307 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 GALK2Q01415 458 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 NCMAPQ5T1S8 102 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 LIPNQ5VXI9 398 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 DRAM2Q6UX65 266 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 FAM220AQ7Z4H9 259 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 PAQR4Q8N4S7 273 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 NANOGP1Q8N7R0 232 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 YIPF7Q8N8F6 280 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 ZNF485Q8NCK3 441 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 ZNF799Q96GE5 643 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 C4orf36Q96KX1 117 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 CCDC90BQ9GZT6 254 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 CDH20Q9HBT6 801 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 GNG8Q9UK08 70 aa17.16■□□□□ 0.34
PDLIM2-221ENST00000622702 ABCA4P78363 2273 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 MYL12BO14950 172 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 CRYAAP02489 173 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 PRKXP51817 358 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 CDH15P55291 814 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 PSMA6P60900 246 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 HGFACQ04756 655 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 BSPH1Q075Z2 132 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 OR2G6Q5TZ20 316 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 ZNF773Q6PK81 442 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 DOK1Q99704 481 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 MND1Q9BWT6 205 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 ISG20L2Q9H9L3 353 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 ACOXLQ9NUZ1 547 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 CSMD2Q7Z408 3487 aa17.15■□□□□ 0.34
PDLIM2-221ENST00000622702 NOTCH2Q04721 2471 aa17.14■□□□□ 0.34
PDLIM2-221ENST00000622702 DEFB108AA8MXU0 73 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 J3QLW9 94 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 SIAH2O43255 324 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 MT-ND5P03915 603 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 ZNF19P17023 458 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 CCNOP22674 350 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 PCSK6P29122 969 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 CALCRP30988 508 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 CX3CR1P49238 355 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 MMP16P51512 607 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 NR1H2P55055 460 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 MRPL28Q13084 256 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 TBCEQ15813 527 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 ZNF829Q3KNS6 432 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 COLCA1Q6ZS62 124 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 ZNF283Q8N7M2 679 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 HAVCR2Q8TDQ0 301 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 SPRYD4Q8WW59 207 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 PELI1Q96FA3 418 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 PLPPR2Q96GM1 343 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 CLEC4MQ9H2X3 399 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 SNX5Q9Y5X3 404 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 PLCE1Q9P212 2302 aa17.14■□□□□ 0.33
PDLIM2-221ENST00000622702 TEX15Q9BXT5 2789 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 J3QW42 95 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 SRSF10O75494 262 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 GOSR1O95249 250 aa17.13■□□□□ 0.33
PDLIM2-221ENST00000622702 WNT5AP41221 380 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms