RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ZNF141Q15928 474 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 PLPPR5Q32ZL2 321 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 SNAI3Q3KNW1 292 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 ARHGAP11BQ3KRB8 267 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 MOGAT2Q3SYC2 334 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 BEND6Q5SZJ8 279 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 DCST2Q5T1A1 773 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 ANXA8L1Q5VT79 327 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 RAET1LQ5VY80 246 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR5M10Q6IEU7 315 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 ANKRD26P1Q6NSI1 321 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 CHMP1BQ7LBR1 199 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 C6orf120Q7Z4R8 191 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 SPATA19Q7Z5L4 167 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 MARCH3Q86UD3 253 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 GRAMD2AQ8IUY3 354 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 KRTCAP2Q8N6L1 136 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 LRTM2Q8N967 370 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR5T2Q8NGG2 359 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 CLHC1Q8NHS4 586 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 AGR3Q8TD06 166 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 TLCD1Q96CP7 247 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 STARD4Q96DR4 205 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 NEURL3Q96EH8 262 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 C16orf58Q96GQ5 468 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 RADILQ96JH8 1075 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 C2orf48Q96LS8 159 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 FAM218AQ96MZ4 157 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR7D2Q96RA2 312 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 SDF2Q99470 211 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 C1orf50Q9BV19 199 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 RBM24Q9BX46 236 aaKnown RBP2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 DPY30Q9C005 99 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 NMUR2Q9GZQ4 415 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 RIMS4Q9H426 269 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 RNF122Q9H9V4 155 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 POLE3Q9NRF9 147 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 GLRX2Q9NS18 164 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 MED17Q9NVC6 651 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 MED11Q9P086 117 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 GIMAP2Q9UG22 337 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 BTNL2Q9UIR0 455 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 DKKL1Q9UK85 242 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 SELENOKQ9Y6D0 94 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 V9GYY5 206 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 NSD1Q96L73 2696 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 ALPK2Q86TB3 2170 aa2.97□□□□□ -1.93
CKS1BP3-201ENST00000600888 TLN2Q9Y4G6 2542 aa2.96□□□□□ -1.93
CKS1BP3-201ENST00000600888 ARFGEF3Q5TH69 2177 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 IGKV3D-20A0A0C4DH25 116 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 A0A0J9YW62 118 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 A0A1W2PPW3 197 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMEM120BA0PK00 339 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 SERINC4A6NH21 518 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC22A20A6NK97 555 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 TRPC5OSA6NMA1 111 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 ANXA2P2A6NMY6 339 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 GJE1A6NN92 205 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 EEF1E1-BLOC1S5C9J1V9 151 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 E9PBE3 544 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 H3BNH8 94 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 FAAHO00519 579 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 SDHDO14521 159 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 CFLARO15519 480 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF264O43296 627 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 EEF1E1O43324 174 aaKnown RBP2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 IDH3BO43837 385 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 SS18L1O75177 396 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 STX11O75558 287 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 UGT2B17O75795 530 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 AQP8O94778 261 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 PABPC4LP0CB38 370 aaKnown RBP2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZCCHC18P0CG32 403 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 ATP6V1C1P21283 382 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 BGNP21810 368 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 ME2P23368 584 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 FKBP2P26885 142 aaKnown RBP2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 S100A3P33764 101 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 CD79BP40259 229 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 RFX3P48380 749 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMEM50BP56557 158 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF117Q03924 483 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 SRYQ05066 204 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 STX5Q13190 355 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 SRSF9Q13242 221 aaKnown RBP eCLIP2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 PON3Q15166 354 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 CD226Q15762 336 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 SGCBQ16585 318 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 FAM174BQ3ZCQ3 159 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 CCNJQ5T5M9 372 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 AGBL2Q5U5Z8 902 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 HHATQ5VTY9 493 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 SAXO2Q658L1 398 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR4F3Q6IEY1 312 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 CBLN3Q6UW01 205 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 FRRS1Q6ZNA5 592 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 MSANTD1Q6ZTZ1 278 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 P4HA3Q7Z4N8 544 aa2.96□□□□□ -1.94
CKS1BP3-201ENST00000600888 NRARPQ7Z6K4 114 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms