RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 MMADHCQ9H3L0 296 aaPredicted RBP11.48□□□□□ -0.57
HDAC5-208ENST00000588419 KRCC1Q9NPI7 259 aaPredicted RBP11.48□□□□□ -0.57
HDAC5-208ENST00000588419 NRIP3Q9NQ35 241 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 VSX1Q9NZR4 365 aaPredicted RBP11.48□□□□□ -0.57
HDAC5-208ENST00000588419 MIOXQ9UGB7 285 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 POLR3KQ9Y2Y1 108 aaPredicted RBP11.48□□□□□ -0.57
HDAC5-208ENST00000588419 ENPP4Q9Y6X5 453 aa11.48□□□□□ -0.57
HDAC5-208ENST00000588419 TRBV4-1A0A0J9YWV2 114 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 F5H5K5 113 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 IFNL4K9M1U5 179 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 HLA-DQA2P01906 255 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 WNT2P09544 360 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 MDKP21741 143 aaPredicted RBP11.47□□□□□ -0.57
HDAC5-208ENST00000588419 FPR3P25089 353 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 CDKN2AP42771 156 aaKnown RBP11.47□□□□□ -0.57
HDAC5-208ENST00000588419 PITPNBP48739 271 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 IL13RA1P78552 427 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 PAX8Q06710 450 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 SLC9A3R2Q15599 337 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 PRAMEF6Q5VXH4 476 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 FBXW12Q6X9E4 464 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 C1orf87Q8N0U7 546 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 BOLLQ8N9W6 283 aaKnown RBP11.47□□□□□ -0.57
HDAC5-208ENST00000588419 FAM156AQ8NDB6 213 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 GJC3Q8NFK1 279 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 ZDHHC16Q969W1 377 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 TECTBQ96PL2 329 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 COQ7Q99807 217 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 NUDT16L1Q9BRJ7 211 aaKnown RBP11.47□□□□□ -0.57
HDAC5-208ENST00000588419 HCAR1Q9BXC0 346 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 FN3KQ9H479 309 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 ANKRD19PQ9H560 264 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 TMEM165Q9HC07 324 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 SRA1Q9HD15 236 aaKnown RBP11.47□□□□□ -0.57
HDAC5-208ENST00000588419 UFSP2Q9NUQ7 469 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 LHFPL6Q9Y693 200 aa11.47□□□□□ -0.57
HDAC5-208ENST00000588419 IQCF6A8MYZ5 107 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 J3QW42 95 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 DCTN6O00399 190 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 HOXA3O43365 443 aaPredicted RBP11.46□□□□□ -0.57
HDAC5-208ENST00000588419 RENP00797 406 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 H2AFXP16104 143 aaPredicted RBP11.46□□□□□ -0.57
HDAC5-208ENST00000588419 CRABP1P29762 137 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 OMPP47874 163 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 FXYD6P3P58550 94 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 HOXA4Q00056 320 aaPredicted RBP11.46□□□□□ -0.57
HDAC5-208ENST00000588419 SPIBQ01892 262 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 KRT72Q14CN4 511 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 SEC23BQ15437 767 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 ZNF404Q494X3 552 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 LYPD2Q6UXB3 125 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 DPY19L2P2Q6ZN68 376 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 CFAP77Q6ZQR2 320 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 OR11L1Q8NGX0 322 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 RAB40AQ8WXH6 277 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 GPX7Q96SL4 187 aaPredicted RBP11.46□□□□□ -0.57
HDAC5-208ENST00000588419 PITX2Q99697 317 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 SLC30A2Q9BRI3 323 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 NSRP1Q9H0G5 558 aaKnown RBP11.46□□□□□ -0.57
HDAC5-208ENST00000588419 ZNF696Q9H7X3 374 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 RPRD1BQ9NQG5 326 aaKnown RBP11.46□□□□□ -0.57
HDAC5-208ENST00000588419 TMEM100Q9NV29 134 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 CLN8Q9UBY8 286 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 ATPIF1Q9UII2 106 aa11.46□□□□□ -0.57
HDAC5-208ENST00000588419 SLC22A2O15244 555 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 PTP4A3O75365 173 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 LCATP04180 440 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 RAD23AP54725 363 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 FGF12P61328 243 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 RUSC1-AS1Q66K80 236 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 PGM2L1Q6PCE3 622 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 SMARCD3Q6STE5 483 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 TREML4Q6UXN2 200 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 TSEN54Q7Z6J9 526 aaKnown RBP11.45□□□□□ -0.58
HDAC5-208ENST00000588419 SDR9C7Q8NEX9 313 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 OR10S1Q8NGN2 331 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 OR2AJ1Q8NGZ0 328 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 OR4K13Q8NH42 304 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 SLCO4A1Q96BD0 722 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 UPRTQ96BW1 309 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 NMNAT3Q96T66 252 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 HOPXQ9BPY8 73 aaPredicted RBP11.45□□□□□ -0.58
HDAC5-208ENST00000588419 PCGF1Q9BSM1 259 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 IFT27Q9BW83 186 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 CDADC1Q9BWV3 514 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 TMCC3Q9ULS5 477 aa11.45□□□□□ -0.58
HDAC5-208ENST00000588419 IGLV1-36A0A0B4J1U3 117 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 A0A1W2PRQ8 180 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 FAM20BO75063 409 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 GMNNO75496 209 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 PLATP00750 562 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 RHCEP18577 417 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 NOS3P29474 1203 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 SLC6A6P31641 620 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 PMELP40967 661 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 PAX2Q02962 417 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 MALLQ13021 153 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 DGCR6Q14129 220 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 OR8G1Q15617 311 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 KCNMB1Q16558 191 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms