RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 PITX2Q99697 317 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 GCM1Q9NP62 436 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 PPIAL4EA0A075B759 164 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 PPIAL4CA0A0B4J2A2 164 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 PPIAL4DF5H284 164 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 F5H5K5 113 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 TMEM178BH3BS89 294 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 PPIAL4FP0DN26 164 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 SLC6A9P48067 706 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 BTG1P62324 171 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.37□□□□□ -0.27
CRLF3-203ENST00000578692 ECH1Q13011 328 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 ZMYND11Q15326 602 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 SLC18B1Q6NT16 456 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 ZNF620Q6ZNG0 422 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 CFAP77Q6ZQR2 320 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 COLCA1Q6ZS62 124 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 C1QTNF5Q9BXJ0 243 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 FN3KQ9H479 309 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 EGLN3Q9H6Z9 239 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 OPN4Q9UHM6 478 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 CYB5R1Q9UHQ9 305 aa13.37□□□□□ -0.27
CRLF3-203ENST00000578692 IQCF6A8MYZ5 107 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 H0YL77 283 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 IFNL4K9M1U5 179 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 TNFRSF11BO00300 401 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 ACSM4P0C7M7 580 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 GGT2P36268 569 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 SRP9P49458 86 aaKnown RBP13.36□□□□□ -0.27
CRLF3-203ENST00000578692 MNAT1P51948 309 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 HILS1P60008 231 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 KRTAP27-1Q3LI81 207 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 CLEC12AQ5QGZ9 265 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 RPL13AP3Q6NVV1 102 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 CYP2R1Q6VVX0 501 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 NAA40Q86UY6 237 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 LINC00471Q8N535 108 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 OR10AD1Q8NGE0 317 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 OR52L1Q8NGH7 329 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 ZNF420Q8TAQ5 688 aaPredicted RBP13.36□□□□□ -0.27
CRLF3-203ENST00000578692 MEGF10Q96KG7 1140 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 JMJD8Q96S16 334 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 ATF6BQ99941 703 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 SLC30A2Q9BRI3 323 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 HCAR1Q9BXC0 346 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 WDR76Q9H967 626 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 MMP26Q9NRE1 261 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 TMEM100Q9NV29 134 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 ACTR3BQ9P1U1 418 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 POLR3KQ9Y2Y1 108 aaPredicted RBP13.36□□□□□ -0.27
CRLF3-203ENST00000578692 LYVE1Q9Y5Y7 322 aa13.36□□□□□ -0.27
CRLF3-203ENST00000578692 B2RBV5 119 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 TRAPPC2LH3BP13 241 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 TRIM77I1YAP6 450 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 GASTP01350 101 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 ZNF823P16415 610 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 SELEP16581 610 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 MDH2P40926 338 aaKnown RBP13.35□□□□□ -0.27
CRLF3-203ENST00000578692 MMP16P51512 607 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 C12orf54Q6X4T0 127 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 MUC20Q8N307 709 aaPredicted RBP13.35□□□□□ -0.27
CRLF3-203ENST00000578692 BHLHE23Q8NDY6 225 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 OR9Q2Q8NGE9 314 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 BTBD10Q9BSF8 475 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 SUCNR1Q9BXA5 334 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 TRIM15Q9C019 465 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 MRPL22Q9NWU5 206 aaKnown RBP13.35□□□□□ -0.27
CRLF3-203ENST00000578692 IL20Q9NYY1 176 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 CDH10Q9Y6N8 788 aa13.35□□□□□ -0.27
CRLF3-203ENST00000578692 F5H0A9 414 aaPredicted RBP13.34□□□□□ -0.27
CRLF3-203ENST00000578692 F5H5P2 479 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 BHLHE40O14503 412 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 MLNRO43193 412 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 LCATP04180 440 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 FPR2P25090 351 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 TPTEP56180 551 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 SEC61A1P61619 476 aaKnown RBP13.34□□□□□ -0.27
CRLF3-203ENST00000578692 TRAP1Q12931 704 aaKnown RBP13.34□□□□□ -0.27
CRLF3-203ENST00000578692 MALLQ13021 153 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 GK2Q14410 553 aaPredicted RBP13.34□□□□□ -0.27
CRLF3-203ENST00000578692 ZNF362Q5T0B9 420 aaPredicted RBP13.34□□□□□ -0.27
CRLF3-203ENST00000578692 BPIFB2Q8N4F0 458 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 FITM2Q8N6M3 262 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 CYB561A3Q8NBI2 242 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 DDOQ99489 341 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 TMEM165Q9HC07 324 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 PNRC2Q9NPJ4 139 aaKnown RBP13.34□□□□□ -0.27
CRLF3-203ENST00000578692 KCNG2Q9UJ96 466 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 WNK2Q9Y3S1 2297 aa13.34□□□□□ -0.27
CRLF3-203ENST00000578692 IGHV3-64DA0A0J9YX35 117 aa13.33□□□□□ -0.27
CRLF3-203ENST00000578692 CCNB2O95067 398 aa13.33□□□□□ -0.27
CRLF3-203ENST00000578692 CYB5R3P00387 301 aaPredicted RBP13.33□□□□□ -0.27
CRLF3-203ENST00000578692 FSHBP01225 129 aa13.33□□□□□ -0.27
CRLF3-203ENST00000578692 HLA-DPB1P04440 258 aa13.33□□□□□ -0.27
CRLF3-203ENST00000578692 WNT2P09544 360 aa13.33□□□□□ -0.27
CRLF3-203ENST00000578692 ATP6V1B2P21281 511 aa13.33□□□□□ -0.27
CRLF3-203ENST00000578692 PYCR1P32322 319 aa13.33□□□□□ -0.27
CRLF3-203ENST00000578692 MAGEA2P43356 314 aa13.33□□□□□ -0.27
CRLF3-203ENST00000578692 PPP1R8Q12972 351 aaKnown RBP13.33□□□□□ -0.27
CRLF3-203ENST00000578692 ZNF154Q13106 437 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms