RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 CAPZBP47756 277 aa15.6■□□□□ 0.09
SCARF1-205ENST00000571272 GABRA4P48169 554 aa15.6■□□□□ 0.09
SCARF1-205ENST00000571272 TMPPEQ6ZT21 453 aa15.6■□□□□ 0.09
SCARF1-205ENST00000571272 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-205ENST00000571272 C9orf40Q8IXQ3 194 aa15.6■□□□□ 0.09
SCARF1-205ENST00000571272 C7orf61Q8IZ16 206 aa15.6■□□□□ 0.09
SCARF1-205ENST00000571272 GTPBP8Q8N3Z3 284 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-205ENST00000571272 OR5AP2Q8NGF4 316 aa15.6■□□□□ 0.09
SCARF1-205ENST00000571272 FOXRED1Q96CU9 486 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-205ENST00000571272 CSAG2Q9Y5P2 127 aa15.6■□□□□ 0.09
SCARF1-205ENST00000571272 PIAS3Q9Y6X2 628 aa15.6■□□□□ 0.09
SCARF1-205ENST00000571272 CD37P11049 281 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 ADCYAP1P18509 176 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 CRABP1P29762 137 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 EFNA3P52797 238 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 SRSF3P84103 164 aaKnown RBP15.59■□□□□ 0.09
SCARF1-205ENST00000571272 TMEM71Q6P5X7 295 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 DCUN1D4Q92564 292 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 FN3KRPQ9HA64 309 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 SLC2A8Q9NY64 477 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 ZNF107Q9UII5 783 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-205ENST00000571272 RAB22AQ9UL26 194 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 ATXN7L1Q9ULK2 861 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-205ENST00000571272 C2orf72A6NCS6 295 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 A8MVM7 634 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 H0YIG0 161 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 EFSO43281 561 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 NPIPB7O75200 414 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 F12P00748 615 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-205ENST00000571272 IL2RAP01589 272 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 IFNA6P05013 189 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 GALNSP34059 522 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 AKR1D1P51857 326 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 POLR2HP52434 150 aaKnown RBP15.59■□□□□ 0.09
SCARF1-205ENST00000571272 FLI1Q01543 452 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-205ENST00000571272 EBPQ15125 230 aaKnown RBP15.59■□□□□ 0.09
SCARF1-205ENST00000571272 C9orf50Q5SZB4 431 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 LDLRAD3Q86YD5 345 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 CBLN2Q8IUK8 224 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 MARCH1Q8TCQ1 289 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 CYYR1Q96J86 154 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 SPACA5Q96QH8 159 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 CHMP1AQ9HD42 196 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-205ENST00000571272 RHBDD3Q9Y3P4 386 aa15.59■□□□□ 0.09
SCARF1-205ENST00000571272 LOC390937A0A1W2PQ73 354 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 EPOPA6NHQ4 379 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 OR6C76A6NM76 312 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 ALG1L2C9J202 215 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 H7C2Y5 167 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 AHSA1O95433 338 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 ACTL6AO96019 429 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 SERPINF1P36955 418 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 ZNF704Q6ZNC4 412 aaPredicted RBP15.58■□□□□ 0.09
SCARF1-205ENST00000571272 LYPD6Q86Y78 171 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 FAM219AQ8IW50 185 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 SLC26A10Q8NG04 563 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 OR2I1PQ8NGU4 316 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 ST7LQ8TDW4 575 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 ROBO4Q8WZ75 1007 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 MTIF3Q9H2K0 278 aaKnown RBP15.58■□□□□ 0.09
SCARF1-205ENST00000571272 MKL2Q9ULH7 1088 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 KCNK7Q9Y2U2 307 aa15.58■□□□□ 0.09
SCARF1-205ENST00000571272 BRWD1Q9NSI6 2320 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 ASXL3Q9C0F0 2248 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 A0A0B4J2A0 478 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 NUDT21O43809 227 aaKnown RBP15.58■□□□□ 0.08
SCARF1-205ENST00000571272 H2BFMP0C1H6 154 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 VSIG8P0DPA2 414 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 HLA-GP17693 338 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 RPL35P42766 123 aaKnown RBP15.58■□□□□ 0.08
SCARF1-205ENST00000571272 SLC26A5P58743 744 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 HAGHLQ6PII5 290 aaPredicted RBP15.58■□□□□ 0.08
SCARF1-205ENST00000571272 ZNF813Q6ZN06 617 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 RNF144BQ7Z419 303 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 OR4K17Q8NGC6 315 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 OR5T2Q8NGG2 359 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 ZC3H10Q96K80 434 aaKnown RBP15.58■□□□□ 0.08
SCARF1-205ENST00000571272 FOXQ1Q9C009 403 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 TMEM231Q9H6L2 316 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 MED29Q9NX70 200 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 PRR13Q9NZ81 148 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 SHPKQ9UHJ6 478 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 ZNF175Q9Y473 711 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 RTTNQ86VV8 2226 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 CNTRLQ7Z7A1 2325 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 PSMB6P28072 239 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 COL13A1Q5TAT6 717 aaPredicted RBP15.58■□□□□ 0.08
SCARF1-205ENST00000571272 TMEM244Q5VVB8 128 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 PTCRAQ6ISU1 281 aaPredicted RBP15.58■□□□□ 0.08
SCARF1-205ENST00000571272 ARMC10Q8N2F6 343 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 NKAIN3Q8N8D7 197 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 ZDHHC22Q8N966 263 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 OR13C9Q8NGT0 318 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 ELP5Q8TE02 316 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 ADAT3Q96EY9 351 aaPredicted RBP15.58■□□□□ 0.08
SCARF1-205ENST00000571272 PDE7BQ9NP56 450 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 MLXQ9UH92 298 aa15.58■□□□□ 0.08
SCARF1-205ENST00000571272 TMEM131Q92545 1883 aa15.57■□□□□ 0.08
SCARF1-205ENST00000571272 TSPAN2O60636 221 aa15.57■□□□□ 0.08
SCARF1-205ENST00000571272 ISG15P05161 165 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms