RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 FZR1Q9UM11 496 aa12.47□□□□□ -0.41
COMMD4-225ENST00000569245 UGT2A1Q9Y4X1 527 aa12.47□□□□□ -0.41
COMMD4-225ENST00000569245 A0A087WXM4 84 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 IGKV1D-43A0A0B4J1Z2 117 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 TRIM64CA6NLI5 447 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 J3QRE1 110 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 RGS10O43665 173 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 FADS2O95864 444 aaKnown RBP12.46□□□□□ -0.41
COMMD4-225ENST00000569245 HTR1AP08908 422 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 SBK2P0C263 348 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 FAM157BP0CG42 384 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 CCNOP22674 350 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 EEF1B2P24534 225 aaKnown RBP12.46□□□□□ -0.41
COMMD4-225ENST00000569245 APLNRP35414 380 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 GLRXP35754 106 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 PPOXP50336 477 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 PDLIM4P50479 330 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 GLO1Q04760 184 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 DBPQ10586 325 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-225ENST00000569245 ST3GAL4Q11206 333 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 TBC1D28Q2M2D7 210 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 PABPC1L2AQ5JQF8 200 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 RNLSQ5VYX0 342 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 ZNF773Q6PK81 442 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 FOXL2NBQ6ZUU3 175 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 PRSS48Q7RTY5 328 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 ZCCHC24Q8N2G6 241 aaKnown RBP12.46□□□□□ -0.41
COMMD4-225ENST00000569245 STX19Q8N4C7 294 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 TSPAN14Q8NG11 270 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 OR52I1Q8NGK6 324 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 OR6K6Q8NGW6 343 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 SGCDQ92629 289 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.41
COMMD4-225ENST00000569245 ZMYND19Q96E35 227 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-225ENST00000569245 TMEM80Q96HE8 168 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 DOK1Q99704 481 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 SYT3Q9BQG1 590 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 JAM3Q9BX67 310 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 OR51B6Q9H340 312 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 ADGRL4Q9HBW9 690 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 ERVK-18Q9QC07 812 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 DUSP13Q9UII6 198 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 DIMT1Q9UNQ2 313 aaKnown RBP12.46□□□□□ -0.41
COMMD4-225ENST00000569245 COA3Q9Y2R0 106 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-225ENST00000569245 PCDHGB1Q9Y5G3 927 aa12.46□□□□□ -0.41
COMMD4-225ENST00000569245 A0A1W2PPW3 197 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 TMEM129A0AVI4 362 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 LCKP06239 509 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 ADRA2AP08913 450 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 SMIM18P0DKX4 95 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 GAAP10253 952 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 SLC25A16P16260 332 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 HOXB4P17483 251 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-225ENST00000569245 DCKP27707 260 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 LAP3P28838 519 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 ATP6V1E1P36543 226 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 GLB1L2Q8IW92 636 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 TIGD4Q8IY51 512 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 PAQR4Q8N4S7 273 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-225ENST00000569245 ZNF511Q8NB15 262 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 OR51G2Q8NGK0 314 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 C10orf105Q8TEF2 133 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 NABP1Q96AH0 204 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 POM121Q96HA1 1249 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 CNN2Q99439 309 aaKnown RBP12.45□□□□□ -0.42
COMMD4-225ENST00000569245 CDCA4Q9BXL8 241 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 MRPL37Q9BZE1 423 aaKnown RBP12.45□□□□□ -0.42
COMMD4-225ENST00000569245 RERGLQ9H628 205 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 CSPG4Q6UVK1 2322 aa12.45□□□□□ -0.42
COMMD4-225ENST00000569245 SYNGR3O43761 229 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 IGHA1P01876 353 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 MMP7P09237 267 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-225ENST00000569245 ZNF32P17041 273 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 APEX1P27695 318 aaKnown RBP12.44□□□□□ -0.42
COMMD4-225ENST00000569245 C21orf33P30042 268 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-225ENST00000569245 RAD52P43351 418 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 EVX1P49640 407 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 CDH15P55291 814 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 SELENOVP59797 346 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 PCBD1P61457 104 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 IRF3Q14653 427 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 KCNMB1Q16558 191 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 FAM27BQ5VT28 67 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 RGS7BPQ6MZT1 257 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-225ENST00000569245 SLC16A9Q7RTY1 509 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 ALDH16A1Q8IZ83 802 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 SPARTQ8N0X7 666 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 CPEB3Q8NE35 698 aaKnown RBP12.44□□□□□ -0.42
COMMD4-225ENST00000569245 SLC26A10Q8NG04 563 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 AKR7LQ8NHP1 331 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 MNTQ99583 582 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 PIMREGQ9BSJ6 248 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 TPK1Q9H3S4 243 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 INPP5EQ9NRR6 644 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 MRPL22Q9NWU5 206 aaKnown RBP12.44□□□□□ -0.42
COMMD4-225ENST00000569245 TLN2Q9Y4G6 2542 aa12.44□□□□□ -0.42
COMMD4-225ENST00000569245 LOC390937A0A1W2PQ73 354 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 C12orf71A8MTZ7 269 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 INAFM1C9JVW0 142 aa12.43□□□□□ -0.42
COMMD4-225ENST00000569245 M0R233 179 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms