RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ATF1P18846 271 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 F2RP25116 425 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 CCR2P41597 374 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 DAPP51397 102 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 B3GNTL1Q67FW5 361 aaPredicted RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 LCN10Q6JVE6 187 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 FAM199XQ6PEV8 388 aaPredicted RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 OR52I1Q8NGK6 324 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 GPX8Q8TED1 209 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 PKMYT1Q99640 499 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 GABARAPL3Q9BY60 117 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 MS4A5Q9H3V2 200 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 ZNF768Q9H5H4 540 aaKnown RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 RCE1Q9Y256 329 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 TMPRSS11DO60235 418 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 ATP6V1G1O75348 118 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 JUNBP17275 347 aaPredicted RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 GDNFP39905 211 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 PHC2Q8IXK0 858 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 UTP4Q969X6 686 aaKnown RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 DUS3LQ96G46 650 aaKnown RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 PLEKHA2Q9HB19 425 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 OMGP23515 440 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 UBE2G1P62253 170 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 INSM1Q01101 510 aaPredicted RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 SLC17A1Q14916 467 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 SHEQ5VZ18 495 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 GUSBP11Q6P575 273 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 MFSD4AQ8N468 514 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 LGALS14Q8TCE9 139 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 GALMQ96C23 342 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 DDA1Q9BW61 102 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 ACKR4Q9NPB9 350 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 RBFOX1Q9NWB1 397 aaKnown RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 TRAV38-1A0A0B4J264 116 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 H3BMQ9 156 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 LGALS8O00214 317 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 PGGT1BP53609 377 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 TIGD3Q6B0B8 471 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 BBS1Q8NFJ9 593 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 OR6S1Q8NH40 331 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 HSD17B8Q92506 261 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 POM121L2Q96KW2 1035 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 NRSN2Q9GZP1 204 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 PPIL3Q9H2H8 161 aaKnown RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 ASF1BQ9NVP2 202 aa10.83□□□□□ -0.68
NEK9-210ENST00000557026 GAR1Q9NY12 217 aaKnown RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 STRAPQ9Y3F4 350 aaKnown RBP10.83□□□□□ -0.68
NEK9-210ENST00000557026 AQP7P3A6NL99 342 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 H7C1C5 153 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 KLF3P57682 345 aaPredicted RBP10.82□□□□□ -0.68
NEK9-210ENST00000557026 SSTP61278 116 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 LTC4SQ16873 150 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 D2HGDHQ8N465 521 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 VSTM2AQ8TAG5 236 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 SLC38A1Q9H2H9 487 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 UPK1AO00322 258 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 PPP6CO00743 305 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 CTSLP07711 333 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 RAB4AP20338 218 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 NKX2-1P43699 371 aaPredicted RBP10.82□□□□□ -0.68
NEK9-210ENST00000557026 ACOT6Q3I5F7 207 aaPredicted RBP10.82□□□□□ -0.68
NEK9-210ENST00000557026 COL13A1Q5TAT6 717 aaPredicted RBP10.82□□□□□ -0.68
NEK9-210ENST00000557026 LIPNQ5VXI9 398 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 CST9LP1Q5W188 147 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 OR13C8Q8NGS7 320 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 RNF141Q8WVD5 230 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 HEXA-AS1Q9H8Q6 139 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 FAM53CQ9NYF3 392 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 FOXD3Q9UJU5 478 aaPredicted RBP10.82□□□□□ -0.68
NEK9-210ENST00000557026 A0A087WUJ7 227 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 RPL11P62913 178 aaKnown RBP10.82□□□□□ -0.68
NEK9-210ENST00000557026 FOXF1Q12946 379 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 SQSTM1Q13501 440 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 SPRED3Q2MJR0 410 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 CCSMST1Q4G0I0 132 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 DYNC2LI1Q8TCX1 351 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 SMIM14Q96QK8 99 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 TMEM231Q9H6L2 316 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 TXNL4BQ9NX01 149 aaKnown RBP10.82□□□□□ -0.68
NEK9-210ENST00000557026 OR6C3Q9NZP0 311 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 OR5V1Q9UGF6 321 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 KCNMB2Q9Y691 235 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 AQP8O94778 261 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 GALP22466 123 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 Q6ZS52 159 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 ADGRF3Q8IZF5 1079 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 NANOGP1Q8N7R0 232 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 ZNF511Q8NB15 262 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 TMEM171Q8WVE6 324 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 SLCO4A1Q96BD0 722 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 PINX1Q96BK5 328 aaKnown RBP10.82□□□□□ -0.68
NEK9-210ENST00000557026 C8orf44Q96CB5 159 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 FBXO8Q9NRD0 319 aa10.82□□□□□ -0.68
NEK9-210ENST00000557026 MN1Q10571 1320 aaPredicted RBP10.82□□□□□ -0.68
NEK9-210ENST00000557026 BCORQ6W2J9 1755 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 DOCK1Q14185 1865 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 CDX4O14627 284 aaPredicted RBP10.81□□□□□ -0.68
NEK9-210ENST00000557026 ARPC3O15145 178 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 TRAPPC2P0DI81 140 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms