RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 KNG1P01042 644 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 PGAM2P15259 253 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 ANOS1P23352 680 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 LUMP51884 338 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 SNU13P55769 128 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 HLXQ14774 488 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 NR0B2Q15466 257 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 SEZ6L2Q6UXD5 910 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 TMEM156Q8N614 296 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF75AQ96N20 296 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 GPR84Q9NQS5 396 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 EXOSC3Q9NQT5 275 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 OCIAD1Q9NX40 245 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 PFDN2Q9UHV9 154 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 R4GMQ9 66 aa12.19□□□□□ -0.46
PRPF40B-209ENST00000548825 PATE3B3GLJ2 98 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF814B7Z6K7 855 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 SULT1B1O43704 296 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 RLN2P04090 185 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 PATE4P0C8F1 98 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 TAS2R19P59542 299 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 C9orf135Q5VTT2 229 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF574Q6ZN55 896 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 ADGRE4PQ86SQ3 457 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 APCDD1LQ8NCL9 501 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 PIGTQ969N2 578 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 ZBTB8AQ96BR9 441 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 ZCCHC4Q9H5U6 513 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 ACKR4Q9NPB9 350 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 SDHAF2Q9NX18 166 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 KLK13Q9UKR3 277 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 TRBV5-7A0A0A0MS05 114 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 F5H0A9 414 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 NUDT21O43809 227 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 FADS1O60427 444 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 QDPRP09417 244 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 SERPINA2P20848 420 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 C4BPBP20851 252 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 BDKRB2P30411 391 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF93P35789 620 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 NUDT1P36639 197 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 CXCL12P48061 93 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 MAP2K6P52564 334 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 CLDN6P56747 220 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 PDCD1Q15116 288 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 PTCRAQ6ISU1 281 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 BRICD5Q6PL45 260 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 GLIPR1L1Q6UWM5 242 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 PLXDC2Q6UX71 529 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 ANKRD37Q7Z713 158 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 TMEM104Q8NE00 496 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF519Q8TB69 540 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 RBPMSQ93062 196 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 PBOV1Q9GZY1 135 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 CHST11Q9NPF2 352 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 TAS2R8Q9NYW2 309 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 LOC400499M0QZD8 3231 aa12.18□□□□□ -0.46
PRPF40B-209ENST00000548825 A0A1W2PPC1 479 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 BLACEA4D250 179 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 SIGLEC6O43699 453 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 DAP3P51398 398 aaKnown RBP12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 MRPS10P82664 201 aaKnown RBP12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 SIGIRRQ6IA17 410 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 CATSPERDQ86XM0 798 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 D2HGDHQ8N465 521 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 MARCH1Q8TCQ1 289 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 NCOA6Q14686 2063 aaPredicted RBP12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 DXOO77932 396 aaKnown RBP12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 TXNDC12O95881 172 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 LPLP06858 475 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 GIPP09681 153 aaPredicted RBP12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 RFC3P40938 356 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 DHRS2Q13268 280 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 ISXQ2M1V0 245 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 SMUG1Q53HV7 270 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 Q7L0L9 218 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 C1orf198Q9H425 327 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 NPDC1Q9NQX5 325 aaPredicted RBP12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 GDF2Q9UK05 429 aaPredicted RBP12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 PTRH2Q9Y3E5 179 aaKnown RBP12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 SESN1Q9Y6P5 492 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 C5orf63A6NC05 138 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 EFNA2O43921 213 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 TRAPPC6AO75865 159 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 LAP3P28838 519 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 OR3A4PP47883 348 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 DCDP81605 110 aaKnown RBP12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 OR6M1Q8NGM8 313 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 S100A13Q99584 98 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 RHBDD3Q9Y3P4 386 aa12.17□□□□□ -0.46
PRPF40B-209ENST00000548825 CCNOP22674 350 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 NUP62P37198 522 aaPredicted RBP12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 ZNF121P58317 390 aaPredicted RBP12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 PPP1R1AQ13522 171 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 PPP1R3BQ86XI6 285 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 CLEC1AQ8NC01 280 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 ADAD2Q8NCV1 583 aaKnown RBP12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 CCDC107Q8WV48 283 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 ROBO4Q8WZ75 1007 aa12.16□□□□□ -0.46
PRPF40B-209ENST00000548825 WNT2BQ93097 391 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms