RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 KRT84Q9NSB2 600 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 DECR2Q9NUI1 292 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 CGGBP1Q9UFW8 167 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-204ENST00000547517 PURGQ9UJV8 347 aaKnown RBP10.08□□□□□ -0.8
RAB5C-204ENST00000547517 ZFHX3Q15911 3703 aa10.08□□□□□ -0.8
RAB5C-204ENST00000547517 LRP5LA4QPB2 252 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 INAFM1C9JVW0 142 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 M0R135 149 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 ZNF593O00488 134 aaPredicted RBP10.07□□□□□ -0.8
RAB5C-204ENST00000547517 CD5LO43866 347 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 MITFO75030 526 aaPredicted RBP10.07□□□□□ -0.8
RAB5C-204ENST00000547517 GLCEO94923 617 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 ACHEP22303 614 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 TUBG1P23258 451 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 COL8A2P25067 703 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 GSTT1P30711 240 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 BLVRAP53004 296 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 CRISP1P54107 249 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 ACTR3P61158 418 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 PPP2R2BQ00005 443 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 RIN1Q13671 783 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 TRIP10Q15642 601 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 USP51Q70EK9 711 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 SPATC1Q76KD6 591 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 OR5AS1Q8N127 324 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 BBS1Q8NFJ9 593 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 OR5L1Q8NGL2 311 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 SPTSSAQ969W0 71 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 SLAMF6Q96DU3 332 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 ZMYND19Q96E35 227 aaPredicted RBP10.07□□□□□ -0.8
RAB5C-204ENST00000547517 ZNF799Q96GE5 643 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 INTS14Q96SY0 518 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 YAE1D1Q9NRH1 226 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 TUBG2Q9NRH3 451 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 CYSLTR2Q9NS75 346 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 ZNF275Q9NSD4 429 aaPredicted RBP10.07□□□□□ -0.8
RAB5C-204ENST00000547517 DDX28Q9NUL7 540 aaKnown RBP10.07□□□□□ -0.8
RAB5C-204ENST00000547517 NKIRAS2Q9NYR9 191 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 TVP23BQ9NYZ1 205 aa10.07□□□□□ -0.8
RAB5C-204ENST00000547517 CHD3Q12873 2000 aaKnown RBP10.07□□□□□ -0.8
RAB5C-204ENST00000547517 CSPG4Q6UVK1 2322 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 NF1P21359 2839 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 IGHV1-69-2A0A0G2JMI3 117 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 SAC3D1A6NKF1 404 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 ZNF878C9JN71 531 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 M0R129 80 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 PPIHO43447 177 aaKnown RBP10.06□□□□□ -0.8
RAB5C-204ENST00000547517 SELENOFO60613 162 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 RP2O75695 350 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 LCATP04180 440 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 IGHV4-31P0DP07 118 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 KITLGP21583 273 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 IGFBP5P24593 272 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 LIPAP38571 399 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 GPR6P46095 362 aaPredicted RBP10.06□□□□□ -0.8
RAB5C-204ENST00000547517 CHN2P52757 468 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 TPTEP56180 551 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 PRSS12P56730 875 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 RPS7P62081 194 aaKnown RBP10.06□□□□□ -0.8
RAB5C-204ENST00000547517 MRPS11P82912 194 aaKnown RBP10.06□□□□□ -0.8
RAB5C-204ENST00000547517 EIF2B1Q14232 305 aaKnown RBP10.06□□□□□ -0.8
RAB5C-204ENST00000547517 TAF13Q15543 124 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 SNAPC1Q16533 368 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 ZSCAN26Q16670 478 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 PCK2Q16822 640 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 RSPO1Q2MKA7 263 aaPredicted RBP10.06□□□□□ -0.8
RAB5C-204ENST00000547517 FAM209AQ5JX71 171 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 C6orf52Q5T4I8 152 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 CXXC5Q7LFL8 322 aaKnown RBP10.06□□□□□ -0.8
RAB5C-204ENST00000547517 CPOQ8IVL8 374 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 ST7LQ8TDW4 575 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 PTP4A1Q93096 173 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 HAVCR1Q96D42 359 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 C1QTNF5Q9BXJ0 243 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 NARFLQ9H6Q4 476 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 CENPMQ9NSP4 180 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 OAZ3Q9UMX2 235 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 CACNG2Q9Y698 323 aa10.06□□□□□ -0.8
RAB5C-204ENST00000547517 ANK3Q12955 4377 aaKnown RBP10.06□□□□□ -0.8
RAB5C-204ENST00000547517 TLN2Q9Y4G6 2542 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 NSD1Q96L73 2696 aaPredicted RBP10.05□□□□□ -0.8
RAB5C-204ENST00000547517 PRODHO43272 600 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 TLX2O43763 284 aaPredicted RBP10.05□□□□□ -0.8
RAB5C-204ENST00000547517 SLC2A1P11166 492 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 RAC2P15153 192 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 HOXB4P17483 251 aaPredicted RBP10.05□□□□□ -0.8
RAB5C-204ENST00000547517 ANOS1P23352 680 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 NAA10P41227 235 aaPredicted RBP10.05□□□□□ -0.8
RAB5C-204ENST00000547517 PRKXP51817 358 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 ESRRGP62508 458 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 TNFAIP6P98066 277 aaPredicted RBP10.05□□□□□ -0.8
RAB5C-204ENST00000547517 MALLQ13021 153 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 PTGES3Q15185 160 aaKnown RBP10.05□□□□□ -0.8
RAB5C-204ENST00000547517 SNAI3Q3KNW1 292 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 TEX30Q5JUR7 227 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 KDM4DQ6B0I6 523 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 OR2T2Q6IF00 324 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 FBXW12Q6X9E4 464 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 Q6ZR03 302 aa10.05□□□□□ -0.8
RAB5C-204ENST00000547517 COLCA1Q6ZS62 124 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms