RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 A0A0J9YY10 115 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 PRSS37A4D1T9 235 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 BLACEA4D250 179 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 SRSF10O75494 262 aaKnown RBP15.76■□□□□ 0.11
RAB40C-205ENST00000539661 PVRP15151 417 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 S100PP25815 95 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 PMELP40967 661 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 ACTR1BP42025 376 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 LSSP48449 732 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 ACTR1AP61163 376 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 CD226Q15762 336 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 FAM76BQ5HYJ3 339 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 TMEM240Q5SV17 173 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 TMEM244Q5VVB8 128 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 OR52W1Q6IF63 320 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 GVQW1Q8N7I0 195 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 OR4D6Q8NGJ1 314 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 DGAT2Q96PD7 388 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 OR5B2Q96R09 309 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 FN3KRPQ9HA64 309 aa15.76■□□□□ 0.11
RAB40C-205ENST00000539661 DHCR7Q9UBM7 475 aaKnown RBP15.76■□□□□ 0.11
RAB40C-205ENST00000539661 METTL1Q9UBP6 276 aaKnown RBP15.76■□□□□ 0.11
RAB40C-205ENST00000539661 YKT6O15498 198 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 FBXO24O75426 580 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 PET100P0DJ07 73 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 HPGDP15428 266 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 BTG2P78543 158 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 FUT7Q11130 342 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 ZNF704Q6ZNC4 412 aaPredicted RBP15.75■□□□□ 0.11
RAB40C-205ENST00000539661 MAMDC2Q7Z304 686 aaPredicted RBP15.75■□□□□ 0.11
RAB40C-205ENST00000539661 NAA40Q86UY6 237 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 GATSQ8NAP1 163 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 PHOSPHO1Q8TCT1 267 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 CPNE2Q96FN4 548 aaPredicted RBP15.75■□□□□ 0.11
RAB40C-205ENST00000539661 ASB16Q96NS5 453 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 CCDC3Q9BQI4 270 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 ABHD6Q9BV23 337 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 OR10A5Q9H207 317 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 VSX1Q9NZR4 365 aaPredicted RBP15.75■□□□□ 0.11
RAB40C-205ENST00000539661 WDFY3Q8IZQ1 3526 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 IGLV1-36A0A0B4J1U3 117 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 TGFBR3LH3BV60 316 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 ZNF264O43296 627 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 OIP5O43482 229 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 ICOSLGO75144 302 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 MT-ND4LP03901 98 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 FCGR3AP08637 254 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 RCC1P18754 421 aaPredicted RBP15.75■□□□□ 0.11
RAB40C-205ENST00000539661 AGAP20933 346 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 EIF2B1Q14232 305 aaKnown RBP15.75■□□□□ 0.11
RAB40C-205ENST00000539661 FRMD1Q8N878 549 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 OR9A4Q8NGU2 314 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 OR52N5Q8NH56 324 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 METTL21AQ8WXB1 218 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 HIST1H2BAQ96A08 127 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 FAM131CQ96AQ9 280 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 SLC5A7Q9GZV3 580 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 ADAM19Q9H013 955 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 NIT2Q9NQR4 276 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 KPTNQ9Y664 436 aa15.75■□□□□ 0.11
RAB40C-205ENST00000539661 TRAV20A0A0B4J274 112 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 CEACAM18A8MTB9 384 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 BPNT1O95861 308 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 BGLAPP02818 100 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 RNH1P13489 461 aaKnown RBP15.74■□□□□ 0.11
RAB40C-205ENST00000539661 DVL1P1P54792 670 aaPredicted RBP15.74■□□□□ 0.11
RAB40C-205ENST00000539661 BTNL8Q6UX41 500 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 MDGA2Q7Z553 956 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 CHST4Q8NCG5 386 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 ZNF519Q8TB69 540 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 MARCH1Q8TCQ1 289 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 NKD1Q969G9 470 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 C14orf79Q96F83 325 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 ELF4Q99607 663 aaPredicted RBP15.74■□□□□ 0.11
RAB40C-205ENST00000539661 TUBA4BQ9H853 241 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 PARP11Q9NR21 331 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 TIMM10BQ9Y5J6 103 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 LOC107986453A0A1B0GWG9 222 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 LINC01553A4QN01 128 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 FAM221BA6H8Z2 402 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 MSGN1A6NI15 193 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 SCDO00767 359 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 SFT2D2O95562 160 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 APBB3O95704 486 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 ZNF44P15621 663 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 RPL27P61353 136 aaKnown RBP15.74■□□□□ 0.11
RAB40C-205ENST00000539661 CBLN3Q6UW01 205 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 RBMS3Q6XE24 437 aaKnown RBP15.74■□□□□ 0.11
RAB40C-205ENST00000539661 TERB2Q8NHR7 220 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 PDE7BQ9NP56 450 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 PRODH2Q9UF12 536 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 TINAGQ9UJW2 476 aa15.74■□□□□ 0.11
RAB40C-205ENST00000539661 FRYLO94915 3013 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 FAM157AC9JC47 383 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 SLC31A1O15431 190 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 CSTBP04080 98 aaKnown RBP15.73■□□□□ 0.11
RAB40C-205ENST00000539661 HSD11B1P28845 292 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 GDI1P31150 447 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 SULT1A2P50226 295 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 F2RL1P55085 397 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 367.8 ms