RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 PTDSS2Q9BVG9 487 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 NMES1Q9C002 83 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 LYRM4Q9HD34 91 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 AKIP1Q9NQ31 210 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 ACOXLQ9NUZ1 547 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 CLCF1Q9UBD9 225 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 ALOX5APP20292 161 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 LIM2P55344 173 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 MPPED2Q15777 294 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 CLLU1Q5K131 121 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 PLXDC2Q6UX71 529 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 ZNF740Q8NDX6 193 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 PHYHIPLQ96FC7 376 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 TEAD3Q99594 435 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 DEDDO75618 318 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 FKBP2P26885 142 aaKnown RBP9.08□□□□□ -0.96
COL4A6-208ENST00000538570 SYT14P1Q58G82 188 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 ADGRG3Q86Y34 549 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 OR4F5Q8NH21 305 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 TSLPQ969D9 159 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 ARSGQ96EG1 525 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 SCMH1Q96GD3 660 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 OR4F4Q96R69 305 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 SLC22A12Q96S37 553 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 ZNF2Q9BSG1 426 aaPredicted RBP9.08□□□□□ -0.96
COL4A6-208ENST00000538570 CABLES2Q9BTV7 478 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 EGLN1Q9GZT9 426 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 MBD1Q9UIS9 605 aaPredicted RBP9.08□□□□□ -0.96
COL4A6-208ENST00000538570 CCDC88AQ3V6T2 1871 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 AKR1C3P42330 323 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 HIST1H3AP68431 136 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 CDCP1Q9H5V8 836 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 GFRA2O00451 464 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 NDUFB7P17568 137 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 GNB1P62873 340 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 YOD1Q5VVQ6 348 aaPredicted RBP9.08□□□□□ -0.96
COL4A6-208ENST00000538570 LRRTM1Q86UE6 522 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 DCBLD2Q96PD2 775 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 ACTR3CQ9C0K3 210 aaPredicted RBP9.08□□□□□ -0.96
COL4A6-208ENST00000538570 LANCL2Q9NS86 450 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 FGF21Q9NSA1 209 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 NDRG4Q9ULP0 352 aaKnown RBP9.08□□□□□ -0.96
COL4A6-208ENST00000538570 NTNG1Q9Y2I2 539 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 FLVCR1Q9Y5Y0 555 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 KDM3BQ7LBC6 1761 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 RFPL4AA6NLU0 287 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 RFPL4AL1F8VTS6 287 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 ABCD4O14678 606 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 ALOX12BO75342 701 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 CSNK1EP49674 416 aaKnown RBP9.08□□□□□ -0.96
COL4A6-208ENST00000538570 DOC2BQ14184 412 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 FAM162BQ5T6X4 162 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 FCRL6Q6DN72 434 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 Q6ZN92 141 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 ZNF573Q86YE8 665 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 ZNF687Q8N1G0 1237 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 KIAA1958Q8N8K9 716 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 DYNC2LI1Q8TCX1 351 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 OIT3Q8WWZ8 545 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 KIR3DX1Q9H7L2 352 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 NDUFB11Q9NX14 153 aa9.08□□□□□ -0.96
COL4A6-208ENST00000538570 LOC107986453A0A1B0GWG9 222 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 RAD52P43351 418 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 SLC6A12P48065 614 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 CYB561P49447 251 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 BAMBIQ13145 260 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 ENDOGQ14249 297 aaKnown RBP9.07□□□□□ -0.96
COL4A6-208ENST00000538570 ZNF718Q3SXZ3 478 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 PLAC9Q5JTB6 97 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 FFAR4Q5NUL3 377 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 TRNP1Q6NT89 227 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 GLCCI1Q86VQ1 547 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 SLC16A11Q8NCK7 471 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 BHLHE23Q8NDY6 225 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 OR51I2Q9H344 312 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 SLC22A20A6NK97 555 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 G3V3Q6 166 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 TCN2P20062 427 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 FCGR2CP31995 323 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 ACOT6Q3I5F7 207 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-208ENST00000538570 TMEM52BQ4KMG9 183 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 LHFPL2Q6ZUX7 228 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 M1APQ8TC57 530 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 GPA33Q99795 319 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 MRPS2Q9Y399 296 aaKnown RBP9.07□□□□□ -0.96
COL4A6-208ENST00000538570 CBR3O75828 277 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 NPPBP16860 134 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 OR10A3P58181 314 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 TMEM268Q5VZI3 342 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 OR5AS1Q8N127 324 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 RNF150Q9ULK6 438 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 CHST2Q9Y4C5 530 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 A0A1B0GX78 115 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 ZNF727A8MUV8 499 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 SH2D1BO14796 132 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 SSSCA1O60232 199 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 CDC34P49427 236 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-208ENST00000538570 PRTGQ2VWP7 1150 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 EMC4Q5J8M3 183 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms