RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 DCTN6O00399 190 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 CCL21O00585 134 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 UPK3AO75631 287 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 WISP2O76076 250 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 UBL3O95164 117 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 LY86O95711 162 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 CGAP01215 116 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 TFP02787 698 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 MT-ND5P03915 603 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 KRT8P05787 483 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 GYPBP06028 91 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 CD1AP06126 327 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 COX5BP10606 129 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 CD53P19397 219 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 KLK2P20151 261 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ALOX5APP20292 161 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 PSMB1P20618 241 aaKnown RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 COX5AP20674 150 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 TUBG1P23258 451 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 PSMA1P25786 263 aaKnown RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 C21orf33P30042 268 aaPredicted RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 CHRNB4P30926 498 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 PYCR1P32322 319 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 TGM4P49221 684 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 GBX2P52951 348 aaPredicted RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 WNT4P56705 351 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 KRTAP10-11P60412 298 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 UBE2NP61088 152 aaKnown RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 LCN6P62502 163 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 GRB2P62993 217 aaKnown RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ARF1P84077 181 aaKnown RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ACSM1Q08AH1 577 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 FAPQ12884 760 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 MRPL49Q13405 166 aaKnown RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 IRF3Q14653 427 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 SPHARQ15513 63 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 TAF13Q15543 124 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 SGCAQ16586 387 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 CEACAM16Q2WEN9 425 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 C3orf36Q3SXR2 165 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 FBXL19-AS1Q494R0 122 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 PRR30Q53SZ7 412 aaPredicted RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 UBE2UQ5VVX9 321 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 TMEM53Q6P2H8 277 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 XKRXQ6PP77 449 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ARL9Q6T311 187 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 KLHL24Q6TFL4 600 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ZNF322Q6U7Q0 402 aaPredicted RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 UNQ6126/PRO20091Q6UXV3 157 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ZNF813Q6ZN06 617 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 SEM1Q6ZVN7 128 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ZNF367Q7RTV3 350 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 SLC16A14Q7RTX9 510 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 NUFIP2Q7Z417 695 aaKnown RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 FAM220AQ7Z4H9 259 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 BCDIN3DQ7Z5W3 292 aaKnown RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 CDC20BQ86Y33 519 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ERI1Q8IV48 349 aaKnown RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 LYSMD2Q8IV50 215 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 SLC35F2Q8IXU6 374 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 C1orf174Q8IYL3 243 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ZNF679Q8IYX0 411 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 CMTM4Q8IZR5 234 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 SPARTQ8N0X7 666 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 GABRG1Q8N1C3 465 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 SLC22A24Q8N4F4 322 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 NANOGP1Q8N7R0 232 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ZNF610Q8N9Z0 462 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 IL17RDQ8NFM7 739 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 STEAP2Q8NFT2 490 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 OR51L1Q8NGJ5 315 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 OR52I1Q8NGK6 324 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 OR6N2Q8NGY6 317 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 SNX33Q8WV41 574 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 RNF133Q8WVZ7 376 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 C11orf40Q8WZ69 217 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 HSD17B8Q92506 261 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 THRSPQ92748 146 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 SPTSSAQ969W0 71 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ZMYND19Q96E35 227 aaPredicted RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 COG8Q96MW5 612 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 TSSK2Q96PF2 358 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 SIGLEC11Q96RL6 698 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 DCLRE1CQ96SD1 692 aaKnown RBP3.34□□□□□ -1.87
C11orf54-204ENST00000527003 COQ7Q99807 217 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ALG8Q9BVK2 526 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 HCAR1Q9BXC0 346 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 CCDC90BQ9GZT6 254 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 HDHD2Q9H0R4 259 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 RERGLQ9H628 205 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 MED20Q9H944 212 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 TRIM36Q9NQ86 728 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 BATF3Q9NR55 127 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 TUBG2Q9NRH3 451 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 SLC7A10Q9NS82 523 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 BABAM2Q9NXR7 383 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 JKAMPQ9P055 326 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ERVK-18Q9QC07 812 aa3.34□□□□□ -1.87
C11orf54-204ENST00000527003 ERRFI1Q9UJM3 462 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms