RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ATPIF1Q9UII2 106 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 GNG8Q9UK08 70 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 POU2F3Q9UKI9 436 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 DIMT1Q9UNQ2 313 aaKnown RBP11.86□□□□□ -0.51
CD44-224ENST00000526669 EXOSC1Q9Y3B2 195 aaKnown RBP11.86□□□□□ -0.51
CD44-224ENST00000526669 RNF115Q9Y4L5 304 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 C5orf63A6NC05 138 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 SHISA9B4DS77 424 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 J3QLW9 94 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 GPRIN2O60269 458 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 KRT8P05787 483 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 ANXA2P07355 339 aaKnown RBP11.85□□□□□ -0.51
CD44-224ENST00000526669 LIMS3P0CW19 117 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 LIMS4P0CW20 117 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 ZNF35P13682 527 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 ZNF19P17023 458 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 MYL12AP19105 171 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 DCKP27707 260 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 PSMB10P40306 273 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 TPTEP56180 551 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 OR12D2P58182 307 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 ERVS71-1P61550 626 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 CSNK2BP67870 215 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 SLC35A2P78381 396 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 ECH1Q13011 328 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 SNTB2Q13425 540 aaKnown RBP11.85□□□□□ -0.51
CD44-224ENST00000526669 GALEQ14376 348 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 DAZAP2Q15038 168 aaPredicted RBP11.85□□□□□ -0.51
CD44-224ENST00000526669 KRTAP27-1Q3LI81 207 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 SPATA46Q5T0L3 261 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 ZNF787Q6DD87 383 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 ZNF679Q8IYX0 411 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 ZNF101Q8IZC7 436 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 ABHD4Q8TB40 342 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 SPTSSAQ969W0 71 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 C4orf36Q96KX1 117 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 C4orf45Q96LM5 186 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 ZNF649Q9BS31 505 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 MROQ9BYG7 248 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 SLC24A3Q9HC58 644 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 ACOXLQ9NUZ1 547 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 GTF2A1LQ9UNN4 478 aa11.85□□□□□ -0.51
CD44-224ENST00000526669 A0A1W2PPR1 153 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 METTL15A6NJ78 407 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 TBX1O43435 398 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 RGS10O43665 173 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 SMPD2O60906 423 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 NGFP01138 241 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 LCATP04180 440 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 LCKP06239 509 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 NR1H2P55055 460 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 CDH15P55291 814 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 ZNF121P58317 390 aaPredicted RBP11.84□□□□□ -0.51
CD44-224ENST00000526669 EGR3Q06889 387 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 MFGE8Q08431 387 aaPredicted RBP11.84□□□□□ -0.51
CD44-224ENST00000526669 CDONQ4KMG0 1287 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 ZNF684Q5T5D7 378 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 OR2G6Q5TZ20 316 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 ZNF704Q6ZNC4 412 aaPredicted RBP11.84□□□□□ -0.51
CD44-224ENST00000526669 FAM57BQ71RH2 274 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 FAM220AQ7Z4H9 259 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 IL17RDQ8NFM7 739 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 SPRYD4Q8WW59 207 aaPredicted RBP11.84□□□□□ -0.51
CD44-224ENST00000526669 IPCEF1Q8WWN9 437 aaPredicted RBP11.84□□□□□ -0.51
CD44-224ENST00000526669 MYDGFQ969H8 173 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 DOK1Q99704 481 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 ISG20L2Q9H9L3 353 aaKnown RBP11.84□□□□□ -0.51
CD44-224ENST00000526669 INPP5EQ9NRR6 644 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 BLOC1S6Q9UL45 172 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 FZR1Q9UM11 496 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 LRCH1Q9Y2L9 728 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 SPG11Q96JI7 2443 aa11.84□□□□□ -0.51
CD44-224ENST00000526669 HTR1AP08908 422 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 OTX1P32242 354 aaPredicted RBP11.83□□□□□ -0.52
CD44-224ENST00000526669 PRSS12P56730 875 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 PSMA6P60900 246 aaKnown RBP11.83□□□□□ -0.52
CD44-224ENST00000526669 ROM1Q03395 351 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 TLE4Q04727 773 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 GFOD2Q3B7J2 385 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 SNAI3Q3KNW1 292 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 LIPNQ5VXI9 398 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 TMEM200AQ86VY9 491 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 ZNF295-AS1Q8N0V1 137 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 KLHL36Q8N4N3 616 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 OR1J1Q8NGS3 322 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 AKAP1Q92667 903 aaKnown RBP eCLIP11.83□□□□□ -0.52
CD44-224ENST00000526669 PPP1R14AQ96A00 147 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 MRPL48Q96GC5 212 aaKnown RBP11.83□□□□□ -0.52
CD44-224ENST00000526669 PGAM5Q96HS1 289 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 DCLRE1CQ96SD1 692 aaKnown RBP11.83□□□□□ -0.52
CD44-224ENST00000526669 JAM3Q9BX67 310 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 DUSP21Q9H596 190 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 CHCHD3Q9NX63 227 aaKnown RBP11.83□□□□□ -0.52
CD44-224ENST00000526669 PTTG3PQ9NZH4 202 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 EIF3KQ9UBQ5 218 aaKnown RBP11.83□□□□□ -0.52
CD44-224ENST00000526669 STARD10Q9Y365 291 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 ABCA12Q86UK0 2595 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 USF3Q68DE3 2245 aa11.83□□□□□ -0.52
CD44-224ENST00000526669 CELSR2Q9HCU4 2923 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms