RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 DPAGT1Q9H3H5 408 aa16.78■□□□□ 0.28
SQSTM1-215ENST00000514093 KAT8Q9H7Z6 458 aaKnown RBP16.78■□□□□ 0.28
SQSTM1-215ENST00000514093 SMURF1Q9HCE7 757 aa16.78■□□□□ 0.28
SQSTM1-215ENST00000514093 FUT4P22083 530 aa16.77■□□□□ 0.28
SQSTM1-215ENST00000514093 MPPED2Q15777 294 aa16.77■□□□□ 0.28
SQSTM1-215ENST00000514093 CLEC12AQ5QGZ9 265 aa16.77■□□□□ 0.28
SQSTM1-215ENST00000514093 C11orf44Q8N8P7 122 aa16.77■□□□□ 0.28
SQSTM1-215ENST00000514093 PNLDC1Q8NA58 520 aaKnown RBP16.77■□□□□ 0.28
SQSTM1-215ENST00000514093 OR11L1Q8NGX0 322 aa16.77■□□□□ 0.28
SQSTM1-215ENST00000514093 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.77■□□□□ 0.28
SQSTM1-215ENST00000514093 FAM96BQ9Y3D0 163 aa16.77■□□□□ 0.28
SQSTM1-215ENST00000514093 V9GYY5 206 aaPredicted RBP16.77■□□□□ 0.28
SQSTM1-215ENST00000514093 PLXNB1O43157 2135 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 ELOVL7A1L3X0 281 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 IQCF6A8MYZ5 107 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 RER1O15258 196 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 ADAM20O43506 726 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 TSPAN9O75954 239 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 GATA4P43694 442 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 PRB3Q04118 309 aaPredicted RBP16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 COX10Q12887 443 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 AQP6Q13520 282 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 FHL1Q13642 323 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 INTS11Q5TA45 600 aaKnown RBP16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 WDR93Q6P2C0 686 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 REC114Q7Z4M0 266 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 LRRC8CQ8TDW0 803 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 RASSF5Q8WWW0 418 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 RERGLQ9H628 205 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 SIGLEC9Q9Y336 463 aa16.76■□□□□ 0.27
SQSTM1-215ENST00000514093 CTLA4P16410 223 aa16.75■□□□□ 0.27
SQSTM1-215ENST00000514093 RGS6P49758 472 aa16.75■□□□□ 0.27
SQSTM1-215ENST00000514093 LOXL3P58215 753 aa16.75■□□□□ 0.27
SQSTM1-215ENST00000514093 VMACQ2NL98 169 aa16.75■□□□□ 0.27
SQSTM1-215ENST00000514093 SLC35E4Q6ICL7 350 aa16.75■□□□□ 0.27
SQSTM1-215ENST00000514093 Q8TCH9 128 aa16.75■□□□□ 0.27
SQSTM1-215ENST00000514093 LRTOMTQ8WZ04 291 aa16.75■□□□□ 0.27
SQSTM1-215ENST00000514093 APOBEC3DQ96AK3 386 aaPredicted RBP16.75■□□□□ 0.27
SQSTM1-215ENST00000514093 ECSITQ9BQ95 431 aa16.75■□□□□ 0.27
SQSTM1-215ENST00000514093 NKIRAS1Q9NYS0 192 aa16.75■□□□□ 0.27
SQSTM1-215ENST00000514093 ADAM18Q9Y3Q7 739 aa16.75■□□□□ 0.27
SQSTM1-215ENST00000514093 OR10H3O60404 316 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 FCN3O75636 299 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 RAD23AP54725 363 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 DBPQ10586 325 aaPredicted RBP16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 OR8B8Q15620 311 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 OXLD1Q5BKU9 147 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 Q6ZTK2 550 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 CCDC80Q76M96 950 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 BTN2A1Q7KYR7 527 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 ITPKCQ96DU7 683 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 Q96M85 177 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 CCDC28BQ9BUN5 200 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 GRHPRQ9UBQ7 328 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 VPREB3Q9UKI3 123 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 COA3Q9Y2R0 106 aaPredicted RBP16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 NDUFAF1Q9Y375 327 aa16.74■□□□□ 0.27
SQSTM1-215ENST00000514093 A0A1B0GWJ7 208 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 J3QW42 95 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 IMPA2O14732 288 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 GZMMP51124 257 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 POU4F2Q12837 409 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 HERPUD1Q15011 391 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 MESTQ5EB52 335 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 VMO1Q7Z5L0 202 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 OAFQ86UD1 273 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 NRMQ8IXM6 262 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 OR13C2Q8NGS9 318 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 HCAR1Q9BXC0 346 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 POLR2J2Q9GZM3 115 aaKnown RBP16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 POLR2J3Q9H1A7 115 aaKnown RBP16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 TOR3AQ9H497 397 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 RNF7Q9UBF6 113 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 DNAJB11Q9UBS4 358 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 BAG5Q9UL15 447 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 FOXJ3Q9UPW0 622 aa16.73■□□□□ 0.27
SQSTM1-215ENST00000514093 TEX13CA0A0J9YWL9 993 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 A0A1W2PRD5 423 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 A0A1W2PRF3 423 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 A0A1W2PRM7 423 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 BTBD17A6NE02 478 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 ANKRD61A6NGH8 418 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 LGALS8O00214 317 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 XKRYO14609 159 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 GPR37O15354 613 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 GYPAP02724 150 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 VSIG8P0DPA2 414 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 RPL4P36578 427 aaKnown RBP16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 TGFBR2P37173 567 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 CD200P41217 278 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 MAGOHP61326 146 aaKnown RBP16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 NFYCQ13952 458 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 KCNJ8Q15842 424 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 BEND6Q5SZJ8 279 aaPredicted RBP16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 FGFRL1Q8N441 504 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 DPP10Q8N608 796 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 CELF2-AS1Q8N7Q2 184 aa16.72■□□□□ 0.27
SQSTM1-215ENST00000514093 ERGIC1Q969X5 290 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms