RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 IL17FQ96PD4 163 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 OR2M4Q96R27 311 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 NMNAT3Q96T66 252 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 ARV1Q9H2C2 271 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 TAC3Q9UHF0 121 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 CENPVL1A0A0U1RR11 272 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 ELOA3DA6NLF2 546 aaPredicted RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF727A8MUV8 499 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 BNIP3LO60238 219 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 DFFBO76075 338 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 SFT2D2O95562 160 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 OR5AC1P0C628 307 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 C8orf89P0DMQ9 161 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 NID1P14543 1247 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 RPS4Y1P22090 263 aaKnown RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 CD52P31358 61 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 KIR3DL2P43630 455 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 CAMLGP49069 296 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 RGS19P49795 217 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 RPP30P78346 268 aaKnown RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 SLC35A1P78382 337 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 CEBPEQ15744 281 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 ELOA3BQ3SY89 546 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 HIKESHIQ53FT3 197 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 EXOSC6Q5RKV6 272 aaKnown RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 LEG1Q6P5S2 330 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 GDPD4Q6W3E5 623 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 MTSS1LQ765P7 747 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 ADGRE4PQ86SQ3 457 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 JAGN1Q8N5M9 183 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 POC1AQ8NBT0 407 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 NAXEQ8NCW5 288 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 RCBTB1Q8NDN9 531 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 ELOA3Q8NG57 546 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 AQP3Q92482 292 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 DTD2Q96FN9 168 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 ADAD1Q96M93 576 aaKnown RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 ZDHHC6Q9H6R6 413 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 FBXL17Q9UF56 701 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 TCFL5Q9UL49 500 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 MEMO1Q9Y316 297 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 STRAPQ9Y3F4 350 aaKnown RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 POLR2AP24928 1970 aaKnown RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 TGIF2-C20orf24A0A0A6YYL0 155 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 A0A1W2PR48 441 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 HSPB2A8KAH6 182 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 CLEC3AO75596 197 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 IFNA6P05013 189 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 FBXO45P0C2W1 286 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 RPL12P30050 165 aaKnown RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 AKT2P31751 481 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 TSFMP43897 325 aaKnown RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 TAF1CQ15572 869 aaPredicted RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 HSPB2Q16082 182 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 AARDQ4LEZ3 155 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 MFSD12Q6NUT3 480 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 SLC35D2Q76EJ3 337 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 HOGA1Q86XE5 327 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 C2orf73Q8N5S3 287 aaPredicted RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 MFSD8Q8NHS3 518 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 POC1BQ8TC44 478 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 METTL21AQ8WXB1 218 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 PTX4Q96A99 478 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 RAB39BQ96DA2 213 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 ALG12Q9BV10 488 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 ZMAT3Q9HA38 289 aaKnown RBP12.41□□□□□ -0.42
HDAC1-206ENST00000476391 GTF2A1LQ9UNN4 478 aa12.41□□□□□ -0.42
HDAC1-206ENST00000476391 TLCD2A6NGC4 264 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 H3BQ15 152 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 K7EPK0 472 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 ARPC3O15145 178 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 SOX15O60248 233 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 LEFTY1O75610 366 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 EPHA1P21709 976 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 APLNRP35414 380 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 GLO1Q04760 184 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 RAB35Q15286 201 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 SLC48A1Q6P1K1 146 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 DPY19L2P2Q6ZN68 376 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 THNSL2Q86YJ6 484 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 FAM71E2Q8N5Q1 922 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 EXD3Q8N9H8 876 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 TSEN15Q8WW01 171 aaKnown RBP12.4□□□□□ -0.42
HDAC1-206ENST00000476391 SDF2Q99470 211 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 PARP12Q9H0J9 701 aaKnown RBP12.4□□□□□ -0.42
HDAC1-206ENST00000476391 CES1P1Q9UKY3 287 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 ENTPD2Q9Y5L3 495 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 EML5Q05BV3 1969 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 A0A0B4J2E0 115 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 A0A1B0GX12 115 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 PEX12O00623 359 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 LDLRAD4O15165 306 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 RPLP1P05386 114 aaKnown RBP12.4□□□□□ -0.42
HDAC1-206ENST00000476391 ERVFC1-1P60608 527 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 UBE2KP61086 200 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 TMEM35AQ53FP2 167 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 C22orf39Q6P5X5 142 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 FJX1Q86VR8 437 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF619Q8N2I2 560 aa12.4□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF283Q8N7M2 679 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms