RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ACTR1AP61163 376 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 PSMC5P62195 406 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 RPS24P62847 133 aaKnown RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 RPS21P63220 83 aaKnown RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 MEF2CQ06413 473 aaPredicted RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 LOXL1Q08397 574 aaPredicted RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 ZNF763Q0D2J5 394 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 PPP2R5CQ13362 524 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 MXD4Q14582 209 aaPredicted RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 ZBTB6Q15916 424 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 INAQ16352 499 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 CARTPTQ16568 116 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 TMEM183BQ1AE95 376 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 KLHL40Q2TBA0 621 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 SLC25A35Q3KQZ1 300 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 C10orf120Q5SQS8 335 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 GPRC6AQ5T6X5 926 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 KRTAP5-10Q6L8G5 202 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 TMEM270Q6UE05 265 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 FAM159AQ6UWV7 190 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 ABHD13Q7L211 337 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 PAQR7Q86WK9 346 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 ZBTB8OSQ8IWT0 167 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 TMEM183AQ8IXX5 376 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 PRSS58Q8IYP2 241 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 OR8H3Q8N146 312 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 SFRP1Q8N474 314 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 SIGLECL1Q8N7X8 197 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 C15orf56Q8N910 161 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 OR10G3Q8NGC4 313 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 OR52K2Q8NGK3 314 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 OR6K2Q8NGY2 324 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 OR10G6Q8NH81 332 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 DQX1Q8TE96 717 aaKnown RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 OR8D1Q8WZ84 308 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 PSMF1Q92530 271 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 RAB7BQ96AH8 199 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 TMIGD2Q96BF3 282 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 EEF2KMTQ96G04 330 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 PGLYRP4Q96LB8 373 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 C9orf72Q96LT7 481 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 WFIKKN1Q96NZ8 548 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 OR5B2Q96R09 309 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 MRPL45Q9BRJ2 306 aaKnown RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 LXNQ9BS40 222 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 SLC25A51Q9H1U9 297 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 RPP21Q9H633 154 aaKnown RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 COPS7BQ9H9Q2 264 aaPredicted RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 NGBQ9NPG2 151 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 SMPD3Q9NY59 655 aaPredicted RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 TREM2Q9NZC2 230 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 SLC17A7Q9P2U7 560 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 DHCR7Q9UBM7 475 aaKnown RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 GLS2Q9UI32 602 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 HS3ST2Q9Y278 367 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 SAMHD1Q9Y3Z3 626 aaKnown RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 PCYT1BQ9Y5K3 369 aaPredicted RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 FADS3Q9Y5Q0 445 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 DOCK11Q5JSL3 2073 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 IGKV2-24A0A0C4DH68 120 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 A0A0U1RRA0 63 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 MDFIC2A0A1B0GVS7 189 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ZNF320A2RRD8 509 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 SMCO2A6NFE2 343 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 OR6C65A6NJZ3 312 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 A8MUI8 341 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 TIMM44O43615 452 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 SLC37A4O43826 429 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 SNRNP200O75643 2136 aaKnown RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 UGT2B17O75795 530 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 TNFSF13O75888 250 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 CD8AP01732 235 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 OPN1MWP04001 364 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 P04436 131 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 KLK3P07288 261 aaPredicted RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ZDHHC11BP0C7U3 371 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ARL14EPLP0DKL9 152 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 OPN1MW2P0DN77 364 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 OPN1MW3P0DN78 364 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 CCDC130P13994 396 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 CCNB1P14635 433 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 PGAM1P18669 254 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 XRCC1P18887 633 aaPredicted RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 USF1P22415 310 aaPredicted RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 SFNP31947 248 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ATP5C1P36542 298 aaKnown RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 UBE2AP49459 152 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 NAPAP54920 295 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 MAP3K7CLP57077 242 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 VSX2P58304 361 aaPredicted RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 KIAA1024LP59773 190 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 GALK2Q01415 458 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 RCN2Q14257 317 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 TRIP10Q15642 601 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 DEFB110Q30KQ9 67 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 BOLA3Q53S33 107 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 C1orf185Q5T7R7 199 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 FAHD2BQ6P2I3 314 aaPredicted RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 SCYL2Q6P3W7 929 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms