RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 GSG1Q2KHT4 349 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 TMEM30BQ3MIR4 351 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 CARD16Q5EG05 197 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 SPANXN4Q5MJ08 99 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 RAB12Q6IQ22 244 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 EIF5AL1Q6IS14 154 aaKnown RBP3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 PWWP2BQ6NUJ5 590 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 H3F3CQ6NXT2 135 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 ARHGAP11AQ6P4F7 1023 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 TMUB2Q71RG4 321 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC16A13Q7RTY0 426 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 DPPA2Q7Z7J5 298 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 SERINC5Q86VE9 423 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 TPRA1Q86W33 373 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 FAM131BQ86XD5 332 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 CCDC71Q8IV32 467 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 MFSD6LQ8IWD5 586 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 STK40Q8N2I9 435 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZNF561Q8N587 486 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 TMEM99Q8N816 258 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 TCEANCQ8N8B7 351 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 SYT14Q8NB59 555 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 OR6K3Q8NGY3 331 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 OR52P1PQ8NH57 321 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 STOML3Q8TAV4 291 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 UBA3Q8TBC4 463 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 SPPL2AQ8TCT8 520 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC7A13Q8TCU3 470 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 RAB3CQ96E17 227 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 WBP1Q96G27 269 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 HPDLQ96IR7 371 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 PANX1Q96RD7 426 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 TRIB3Q96RU7 358 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 ATF6BQ99941 703 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZNF559Q9BR84 538 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 MRPL45Q9BRJ2 306 aaKnown RBP3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 DOHHQ9BU89 302 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 TSSK6Q9BXA6 273 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 DUSP16Q9BY84 665 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 BCL2L14Q9BZR8 327 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 COA1Q9GZY4 146 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 FXYD6Q9H0Q3 95 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 METTL9Q9H1A3 318 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 TUBB1Q9H4B7 451 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 AKIRIN1Q9H9L7 192 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 LRTM1Q9HBL6 345 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZNF302Q9NR11 478 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 NRBP2Q9NSY0 501 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 COMMD9Q9P000 198 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZNF282Q9UDV7 671 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 FBXW2Q9UKT8 454 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 TP53TG5Q9Y2B4 290 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 CA5BQ9Y2D0 317 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC22A7Q9Y694 548 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 NUP210LQ5VU65 1888 aa3.79□□□□□ -1.8
HMGB1P16-201ENST00000447155 TNS1Q9HBL0 1735 aaKnown RBP3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 LCTP09848 1927 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 A0A0A6YYC8 382 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 SMIM30A4D0T7 59 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC9B1P1A6NJY1 282 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 RFPL4AA6NLU0 287 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 C15orf61A6NNL5 157 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 NEDD8-MDP1E9PL57 170 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 RFPL4AL1F8VTS6 287 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 H3BN98 237 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 I3L1I5 382 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 M0QZ92 97 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 HAS3O00219 553 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 CACNB4O00305 520 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 FAAHO00519 579 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 LINC01565O15544 149 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 EEF1E1O43324 174 aaKnown RBP3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 BCL2L11O43521 198 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 GSTZ1O43708 216 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 SAP30O75446 220 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 TOXO94900 526 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 OR2F2O95006 317 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 SIX6O95475 246 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 PNPP00491 289 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 CFDP00746 253 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 IFNA17P01571 189 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 JCHAINP01591 159 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 MT-ND4LP03901 98 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 IL5P05113 134 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 SERPIND1P05546 499 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 KLK3P07288 261 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 HEXBP07686 556 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 IL3P08700 152 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 PRPS1L1P21108 318 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 GSTM3P21266 225 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 GIFP27352 417 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 LAP3P28838 519 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 SRD5A2P31213 254 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 CCR7P32248 378 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 KDELR2P33947 212 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 ARL2P36404 184 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 IFNGR2P38484 337 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 ACTR1BP42025 376 aa3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 RBM34P42696 430 aaKnown RBP3.78□□□□□ -1.8
HMGB1P16-201ENST00000447155 CRATP43155 626 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms