RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 MALLQ13021 153 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 RSPO1Q2MKA7 263 aaPredicted RBP7.84□□□□□ -1.15
NUP50-206ENST00000422489 SPATS1Q496A3 300 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 SLC18B1Q6NT16 456 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 CFAP77Q6ZQR2 320 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 ZBTB46Q86UZ6 589 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 LRRC28Q86X40 367 aaPredicted RBP7.84□□□□□ -1.15
NUP50-206ENST00000422489 DHFR2Q86XF0 187 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 KLHL36Q8N4N3 616 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 LINC00471Q8N535 108 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 ZNF283Q8N7M2 679 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 CYB561A3Q8NBI2 242 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 PROKR2Q8NFJ6 384 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 SLC26A10Q8NG04 563 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 OR10AD1Q8NGE0 317 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 OR9Q2Q8NGE9 314 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 OR51L1Q8NGJ5 315 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 OR13G1Q8NGZ3 307 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 ZNF420Q8TAQ5 688 aaPredicted RBP7.84□□□□□ -1.15
NUP50-206ENST00000422489 NANPQ8TBE9 248 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 OR2V2Q96R30 315 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 TMPRSS13Q9BYE2 586 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 TMEM100Q9NV29 134 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 ACTR3BQ9P1U1 418 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 CDH10Q9Y6N8 788 aa7.84□□□□□ -1.15
NUP50-206ENST00000422489 MXRA5Q9NR99 2828 aa7.84□□□□□ -1.16
NUP50-206ENST00000422489 F5H5P2 479 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 J3QLI3 93 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 CYB5R3P00387 301 aaPredicted RBP7.83□□□□□ -1.16
NUP50-206ENST00000422489 IGHV2-70P01814 119 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 HLA-DPB1P04440 258 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 ACSM4P0C7M7 580 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 SELEP16581 610 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 GGT2P36268 569 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 RPS27P42677 84 aaKnown RBP7.83□□□□□ -1.16
NUP50-206ENST00000422489 SRP9P49458 86 aaKnown RBP7.83□□□□□ -1.16
NUP50-206ENST00000422489 HMGA2P52926 109 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 TPTEP56180 551 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 COX10Q12887 443 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 TRAP1Q12931 704 aaKnown RBP7.83□□□□□ -1.16
NUP50-206ENST00000422489 ECH1Q13011 328 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 ZMYND11Q15326 602 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 TAF13Q15543 124 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 FBXW12Q6X9E4 464 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 ZNF620Q6ZNG0 422 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 C1orf229Q6ZS94 237 aaPredicted RBP7.83□□□□□ -1.16
NUP50-206ENST00000422489 SPICQ8N5J4 248 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.83□□□□□ -1.16
NUP50-206ENST00000422489 AQP11Q8NBQ7 271 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 OR9Q1Q8NGQ5 310 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 OR2T4Q8NH00 348 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 SPRYD4Q8WW59 207 aaPredicted RBP7.83□□□□□ -1.16
NUP50-206ENST00000422489 SPTSSAQ969W0 71 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 OTULINQ96BN8 352 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 MEGF10Q96KG7 1140 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 LRGUKQ96M69 825 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 ATF6BQ99941 703 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 TSSK6Q9BXA6 273 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 TRIM15Q9C019 465 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 PATZ1Q9HBE1 687 aaKnown RBP7.83□□□□□ -1.16
NUP50-206ENST00000422489 GCM1Q9NP62 436 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 CENPMQ9NSP4 180 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 TBC1D23Q9NUY8 699 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 MRPL22Q9NWU5 206 aaKnown RBP7.83□□□□□ -1.16
NUP50-206ENST00000422489 CYB5R1Q9UHQ9 305 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 ATPIF1Q9UII2 106 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 LYVE1Q9Y5Y7 322 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 U3KQV3 271 aa7.83□□□□□ -1.16
NUP50-206ENST00000422489 RTTNQ86VV8 2226 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 A0A0A6YYJ9 748 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 LRRC30A6NM36 301 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 TRAPPC2LH3BP13 241 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 TMEM178BH3BS89 294 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 J3QW42 95 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 SPARCP09486 303 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 IRF2P14316 349 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 GATA3P23771 443 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 FPR2P25090 351 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 FMO3P31513 532 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 SLC6A9P48067 706 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 PRKXP51817 358 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 BTG1P62324 171 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 MS4A2Q01362 244 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 TRIM25Q14258 630 aaKnown RBP7.82□□□□□ -1.16
NUP50-206ENST00000422489 GK2Q14410 553 aaPredicted RBP7.82□□□□□ -1.16
NUP50-206ENST00000422489 TMEM155Q4W5P6 130 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 FAM98BQ52LJ0 330 aaKnown RBP7.82□□□□□ -1.16
NUP50-206ENST00000422489 OR2T5Q6IEZ7 315 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 RPL13AP3Q6NVV1 102 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 C12orf54Q6X4T0 127 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 RASSF6Q6ZTQ3 369 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 PGAP1Q75T13 922 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 MRPL21Q7Z2W9 205 aaKnown RBP7.82□□□□□ -1.16
NUP50-206ENST00000422489 C1QL2Q7Z5L3 287 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 MOGAT3Q86VF5 341 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 BPIFB2Q8N4F0 458 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 SLC37A3Q8NCC5 494 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 CCDC197Q8NCU1 140 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 OR4C15Q8NGM1 316 aa7.82□□□□□ -1.16
NUP50-206ENST00000422489 OR8D4Q8NGM9 314 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms