RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 SHFQ7M4L6 423 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 TGIF2LYQ8IUE0 185 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 GALNT4Q8N4A0 578 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 ZNF525Q8N782 197 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 SYNPRQ8TBG9 265 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 KLF14Q8TD94 323 aaPredicted RBP6.6□□□□□ -1.35
CPSF4-202ENST00000412686 TRMT61AQ96FX7 289 aaKnown RBP6.6□□□□□ -1.35
CPSF4-202ENST00000412686 TEAD3Q99594 435 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 COPS4Q9BT78 406 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 PRRG3Q9BZD7 231 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 DDX28Q9NUL7 540 aaKnown RBP6.6□□□□□ -1.35
CPSF4-202ENST00000412686 TBCCD1Q9NVR7 557 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 NKX1-2Q9UD57 310 aaPredicted RBP6.6□□□□□ -1.35
CPSF4-202ENST00000412686 ENOPH1Q9UHY7 261 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 N6AMT1Q9Y5N5 214 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 PMF1-BGLAPU3KQ54 211 aa6.6□□□□□ -1.35
CPSF4-202ENST00000412686 CHD3Q12873 2000 aaKnown RBP6.6□□□□□ -1.35
CPSF4-202ENST00000412686 NOTCH2Q04721 2471 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 IGHV4-30-2A0A087WSY4 118 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 ZSCAN5BA6NJL1 495 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 VSTM5A8MXK1 200 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 ZNF878C9JN71 531 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 LYNX1G3V0Z9 82 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 M0R135 149 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 MAGEB4O15481 346 aaPredicted RBP6.59□□□□□ -1.35
CPSF4-202ENST00000412686 SPRY3O43610 288 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 LILRA1O75019 489 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 TMCC2O75069 709 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 NCR1O76036 304 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 CLIC3O95833 236 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 LCATP04180 440 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 LYNX1P0DP58 116 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 GCH1P30793 250 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 MAGEB1P43366 347 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 SLC6A9P48067 706 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 KLF3P57682 345 aaPredicted RBP6.59□□□□□ -1.35
CPSF4-202ENST00000412686 PSG7Q13046 419 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 TNK1Q13470 666 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 NKPD1Q17RQ9 610 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 ZNF718Q3SXZ3 478 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 SPRNQ5BIV9 151 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 NXNL2Q5VZ03 156 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 MBNL2Q5VZF2 373 aaKnown RBP6.59□□□□□ -1.35
CPSF4-202ENST00000412686 LRRN1Q6UXK5 716 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 DNM1P46Q6ZS02 220 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 MEPCEQ7L2J0 689 aaKnown RBP6.59□□□□□ -1.35
CPSF4-202ENST00000412686 OR5AS1Q8N127 324 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 MAPK1IP1LQ8NDC0 245 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 OR51G2Q8NGK0 314 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 OR2AE1Q8NHA4 323 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 OTOSQ8NHW6 89 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 THEM6Q8WUY1 208 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 CMBLQ96DG6 245 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 ZNF799Q96GE5 643 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 HRASLS5Q96KN8 279 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 ZNF582Q96NG8 517 aaPredicted RBP6.59□□□□□ -1.35
CPSF4-202ENST00000412686 ELOVL3Q9HB03 270 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 ADGRL4Q9HBW9 690 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 MSL2Q9HCI7 577 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 ATPIF1Q9UII2 106 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 ORC6Q9Y5N6 252 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 GMPPBQ9Y5P6 360 aa6.59□□□□□ -1.35
CPSF4-202ENST00000412686 LRBAP50851 2863 aa6.59□□□□□ -1.36
CPSF4-202ENST00000412686 SLC22A31A6NKX4 558 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 C17orf100A8MU93 164 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 H7C1Q1 480 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 TIMM8AO60220 97 aaPredicted RBP6.58□□□□□ -1.36
CPSF4-202ENST00000412686 ENTPD6O75354 484 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 IGHV3-13P01766 116 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 HPXP02790 462 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 LYNP07948 512 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 BMP4P12644 408 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 GABRB1P18505 474 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 ALOX5APP20292 161 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 OTX1P32242 354 aaPredicted RBP6.58□□□□□ -1.36
CPSF4-202ENST00000412686 OPRL1P41146 370 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 CX3CR1P49238 355 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 EVX1P49640 407 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 MMP15P51511 669 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 EFNA4P52798 201 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 TPTEP56180 551 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 ZNF121P58317 390 aaPredicted RBP6.58□□□□□ -1.36
CPSF4-202ENST00000412686 CDC42P60953 191 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 ECH1Q13011 328 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 GGTLC2Q14390 218 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 TAF13Q15543 124 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 CARTPTQ16568 116 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 TSTQ16762 297 aaKnown RBP6.58□□□□□ -1.36
CPSF4-202ENST00000412686 GLYATL3Q5SZD4 288 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 LCN1P1Q5VSP4 162 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 OR2T2Q6IF00 324 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 PRSS57Q6UWY2 283 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 Q6ZR03 302 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 PLEKHG7Q6ZR37 379 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 COLCA1Q6ZS62 124 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 SSX6Q7RTT6 188 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 SLC16A9Q7RTY1 509 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 LURAP1LQ8IV03 231 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 GID4Q8IVV7 300 aa6.58□□□□□ -1.36
CPSF4-202ENST00000412686 SLC35F2Q8IXU6 374 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms