RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 PHC2Q8IXK0 858 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 OR5AS1Q8N127 324 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 OR4M2Q8NGB6 313 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 OR4C15Q8NGM1 316 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 OR13G1Q8NGZ3 307 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 SPTSSAQ969W0 71 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 CCDC124Q96CT7 223 aaKnown RBP11.64□□□□□ -0.55
CXCL12-205ENST00000395794 ASB9Q96DX5 294 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 BTBD10Q9BSF8 475 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 TSSK6Q9BXA6 273 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 METTL17Q9H7H0 456 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-205ENST00000395794 TMEM106BQ9NUM4 274 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 CYB5R1Q9UHQ9 305 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 PPP1R3CQ9UQK1 317 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 NPTNQ9Y639 398 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 U3KQV3 271 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 TCRBV5S2A0A599 114 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 IFNL4K9M1U5 179 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 BHLHE40O14503 412 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 GNGT2O14610 69 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 PLPP2O43688 288 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 IFNGP01579 166 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 LCATP04180 440 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 RAP2AP10114 183 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 GGT2P36268 569 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 SRP9P49458 86 aaKnown RBP11.63□□□□□ -0.55
CXCL12-205ENST00000395794 TPTEP56180 551 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 MS4A2Q01362 244 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 GK3PQ14409 553 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 OR2T2Q6IF00 324 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 ZNF770Q6IQ21 691 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-205ENST00000395794 KLHL36Q8N4N3 616 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 SPICQ8N5J4 248 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 ZNF454Q8N9F8 522 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 CYB561A3Q8NBI2 242 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 OR2T33Q8NG76 320 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 OR8G5Q8NG78 346 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 OR2V2Q96R30 315 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 THTPAQ9BU02 230 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
CXCL12-205ENST00000395794 C1orf21Q9H246 121 aa11.63□□□□□ -0.55
CXCL12-205ENST00000395794 COL6A5A8TX70 2615 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 CUBNO60494 3623 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 RIIAD1A6NNX1 92 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 J3QLI3 93 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 DEAF1O75398 565 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-205ENST00000395794 T-ENOLP0DO92 83 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 HOXB6P17509 224 aaKnown RBP11.62□□□□□ -0.55
CXCL12-205ENST00000395794 GATA3P23771 443 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 FMO3P31513 532 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 PYCR1P32322 319 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 BLVRAP53004 296 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 TRAP1Q12931 704 aaKnown RBP11.62□□□□□ -0.55
CXCL12-205ENST00000395794 PPP1R8Q12972 351 aaKnown RBP11.62□□□□□ -0.55
CXCL12-205ENST00000395794 TAF13Q15543 124 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 DCAF12L2Q5VW00 463 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 Q6ZR03 302 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 LNX2Q8N448 690 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 ZNF283Q8N7M2 679 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 SLC37A3Q8NCC5 494 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 BHLHE23Q8NDY6 225 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 ITLN1Q8WWA0 313 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 C1QTNF5Q9BXJ0 243 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 DGCR6LQ9BY27 220 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 PLA2G12AQ9BZM1 189 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 WDR76Q9H967 626 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 TMEM100Q9NV29 134 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 TAS2R1Q9NYW7 299 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 MALRD1Q5VYJ5 2156 aa11.62□□□□□ -0.55
CXCL12-205ENST00000395794 TVP23AA6NH52 213 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 LRRC30A6NM36 301 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 GYG2O15488 501 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 FOXH1O75593 365 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 SOX14O95416 240 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 CST1P01037 141 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 ACSM4P0C7M7 580 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 ZNF3P17036 446 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 SLC6A9P48067 706 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 ERFP50548 548 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 BTG1P62324 171 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 DBPQ10586 325 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-205ENST00000395794 KRTAP24-1Q3LI83 254 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 SPRNQ5BIV9 151 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 COLCA1Q6ZS62 124 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 MRPL21Q7Z2W9 205 aaKnown RBP11.61□□□□□ -0.55
CXCL12-205ENST00000395794 OR10G2Q8NGC3 310 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 OR10AD1Q8NGE0 317 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 OR51L1Q8NGJ5 315 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 OR8D4Q8NGM9 314 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 OR9Q1Q8NGQ5 310 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 TEX47Q8TBZ9 253 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 SPRYD4Q8WW59 207 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-205ENST00000395794 CLPTM1LQ96KA5 538 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 C19orf24Q9BVV8 132 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 CHID1Q9BWS9 393 aa11.61□□□□□ -0.55
CXCL12-205ENST00000395794 MRPL22Q9NWU5 206 aaKnown RBP11.61□□□□□ -0.55
CXCL12-205ENST00000395794 NOP16Q9Y3C1 178 aaKnown RBP11.61□□□□□ -0.55
CXCL12-205ENST00000395794 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.6□□□□□ -0.55
CXCL12-205ENST00000395794 SVEP1Q4LDE5 3571 aa11.6□□□□□ -0.55
CXCL12-205ENST00000395794 AQP12BA6NM10 295 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms