RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 C22orf46C9J442 243 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 PTP4A3O75365 173 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 ZNF682O95780 498 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 KNG1P01042 644 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 HLA-DPB1P04440 258 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 GATA4P43694 442 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 PRSS12P56730 875 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 MAPRE2Q15555 327 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 MEP1BQ16820 701 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 RSPO1Q2MKA7 263 aaPredicted RBP11.48□□□□□ -0.57
CXCL12-202ENST00000374426 ZNF362Q5T0B9 420 aaPredicted RBP11.48□□□□□ -0.57
CXCL12-202ENST00000374426 WDR25Q64LD2 544 aaPredicted RBP11.48□□□□□ -0.57
CXCL12-202ENST00000374426 GPR139Q6DWJ6 353 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 ZNF841Q6ZN19 808 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 PTCHD4Q6ZW05 846 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 TSEN54Q7Z6J9 526 aaKnown RBP11.48□□□□□ -0.57
CXCL12-202ENST00000374426 C1orf87Q8N0U7 546 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 KIR3DL3Q8N743 410 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 SLC7A13Q8TCU3 470 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 ZDHHC16Q969W1 377 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 FAM46AQ96IP4 442 aaKnown RBP11.48□□□□□ -0.57
CXCL12-202ENST00000374426 GPX7Q96SL4 187 aaPredicted RBP11.48□□□□□ -0.57
CXCL12-202ENST00000374426 COQ7Q99807 217 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 HDHD2Q9H0R4 259 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 MARCH7Q9H992 704 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 BEX1Q9HBH7 125 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 TNFRSF19Q9NS68 423 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 MRGBPQ9NV56 204 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 C1RLQ9NZP8 487 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 POLR1DQ9Y2S0 133 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 LHFPL6Q9Y693 200 aa11.48□□□□□ -0.57
CXCL12-202ENST00000374426 DCTN6O00399 190 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 SOCS2O14508 198 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 PHYHO14832 338 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 NDUFB2O95178 105 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 FPR3P25089 353 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 PSMB10P40306 273 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 CDKN2AP42771 156 aaKnown RBP11.47□□□□□ -0.57
CXCL12-202ENST00000374426 RAG2P55895 527 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 FXYD6P3P58550 94 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 HOXA4Q00056 320 aaPredicted RBP11.47□□□□□ -0.57
CXCL12-202ENST00000374426 MAB21L1Q13394 359 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 IFI44LQ53G44 452 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 CLEC12AQ5QGZ9 265 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 GPR157Q5UAW9 335 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 RUSC1-AS1Q66K80 236 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 CORO6Q6QEF8 472 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 FIP1L1Q6UN15 594 aaKnown RBP11.47□□□□□ -0.57
CXCL12-202ENST00000374426 Q6YL49 198 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 C17orf107Q6ZR85 190 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 DCDC5Q6ZRR9 648 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 COLCA1Q6ZS62 124 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 RRM2BQ7LG56 351 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.47□□□□□ -0.57
CXCL12-202ENST00000374426 ADCK1Q86TW2 530 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 C19orf18Q8NEA5 215 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 GJC3Q8NFK1 279 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 OR4F5Q8NH21 305 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 Q8TCH9 128 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 HSH2DQ96JZ2 352 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 TSSK2Q96PF2 358 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 CHIAQ9BZP6 476 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 NDEL1Q9GZM8 345 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 ANKRD19PQ9H560 264 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 NOX4Q9NPH5 578 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 TMEM100Q9NV29 134 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 TMEM5Q9Y2B1 443 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 IER3IP1Q9Y5U9 82 aa11.47□□□□□ -0.57
CXCL12-202ENST00000374426 CXCR6O00574 342 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 ENSAO43768 121 aaKnown RBP11.46□□□□□ -0.57
CXCL12-202ENST00000374426 NDUFA7O95182 113 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 SFTPBP07988 381 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 BPIFB3P59826 476 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 DBPQ10586 325 aaPredicted RBP11.46□□□□□ -0.57
CXCL12-202ENST00000374426 SF3A3Q12874 501 aaKnown RBP eCLIP11.46□□□□□ -0.57
CXCL12-202ENST00000374426 COX10Q12887 443 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 GK2Q14410 553 aaPredicted RBP11.46□□□□□ -0.57
CXCL12-202ENST00000374426 KRTAP27-1Q3LI81 207 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 OLFML2AQ68BL7 652 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 FKBP9P1Q75LS8 142 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 CBLL1Q75N03 491 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 SLC15A3Q8IY34 581 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 CELF2-AS1Q8N7Q2 184 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 RCN3Q96D15 328 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 CITED1Q99966 193 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 HCAR1Q9BXC0 346 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 RPS6KA6Q9UK32 745 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 TMCC3Q9ULS5 477 aa11.46□□□□□ -0.57
CXCL12-202ENST00000374426 IGLV1-36A0A0B4J1U3 117 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 A0A0G2JK05 382 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 A0A1W2PRQ8 180 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 TNFRSF13BO14836 293 aaPredicted RBP11.45□□□□□ -0.58
CXCL12-202ENST00000374426 FAM20BO75063 409 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 TXNDC12O95881 172 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 SERPINA1P01009 418 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 CRYBA1P05813 215 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 MELTFP08582 738 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 ACSM4P0C7M7 580 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 IRF2P14316 349 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 MMP9P14780 707 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms