RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 GSTT2P0CG29 244 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 CCL3P10147 92 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 CD82P27701 267 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 BDKRB2P30411 391 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 RBMS2Q15434 407 aaKnown RBP12.44□□□□□ -0.42
USF1-202ENST00000368020 FCN2Q15485 313 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 INPP5JQ15735 1006 aaPredicted RBP12.44□□□□□ -0.42
USF1-202ENST00000368020 FAM189A2Q15884 450 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 SDK2Q58EX2 2172 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 SLC25A25Q6KCM7 469 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 TMEM53Q6P2H8 277 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 PLPP7Q8NBV4 271 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 KCNE4Q8WWG9 221 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 RELTQ969Z4 430 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 DACT3Q96B18 629 aaPredicted RBP12.44□□□□□ -0.42
USF1-202ENST00000368020 ATG5Q9H1Y0 275 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 TMEM138Q9NPI0 162 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 TCFL5Q9UL49 500 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 LHFPL6Q9Y693 200 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 CIB4A0PJX0 185 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 PMS2P1A4D2B8 440 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 NPIPA2E9PIF3 369 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 NPIPA3F8WFD2 350 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 SSNA1O43805 119 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 NDUFB6O95139 128 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 TNFSF15O95150 251 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 TTRP02766 147 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 IL5P05113 134 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 LPLP06858 475 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 QDPRP09417 244 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 ACSM4P0C7M7 580 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 AKAIN1P0CW23 69 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 SULT1A3P0DMM9 295 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 SULT1A4P0DMN0 295 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 CPN1P15169 458 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 SRD5A2P31213 254 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 RCVRNP35243 200 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 ZNF133P52736 654 aaPredicted RBP12.43□□□□□ -0.42
USF1-202ENST00000368020 PCGF3Q3KNV8 242 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 C10orf128Q5T292 105 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 OTPQ5XKR4 325 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 ASPHD2Q6ICH7 369 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 CORO6Q6QEF8 472 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 PGAP1Q75T13 922 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 SLC22A24Q8N4F4 322 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 JAGN1Q8N5M9 183 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 CCDC54Q8NEL0 328 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 SF3B5Q9BWJ5 86 aaKnown RBP12.43□□□□□ -0.42
USF1-202ENST00000368020 GLTPQ9NZD2 209 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 ZNF222Q9UK12 451 aa12.43□□□□□ -0.42
USF1-202ENST00000368020 TRAV18A0A075B6X5 111 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 DCDC2BA2VCK2 349 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 SNRPGP15A8MWD9 76 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 EIF1AYO14602 144 aaKnown RBP12.42□□□□□ -0.42
USF1-202ENST00000368020 RAD1O60671 282 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 APOC1P02654 83 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 CELA2AP08217 269 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 RAB3AP20336 220 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 CSNK1A1P48729 337 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 RPS15P62841 145 aaKnown RBP12.42□□□□□ -0.42
USF1-202ENST00000368020 C19orf57Q0VDD7 668 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 MTFR2Q6P444 385 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 ZNF782Q6ZMW2 699 aaPredicted RBP12.42□□□□□ -0.42
USF1-202ENST00000368020 CREB3L2Q70SY1 520 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 FAM109AQ8N4B1 249 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 ESX1Q8N693 406 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 OR5M1Q8NGP8 315 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 NUDT16L1Q9BRJ7 211 aaKnown RBP12.42□□□□□ -0.42
USF1-202ENST00000368020 METTL17Q9H7H0 456 aaPredicted RBP12.42□□□□□ -0.42
USF1-202ENST00000368020 NOX3Q9HBY0 568 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 RAB22AQ9UL26 194 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 MRPS18CQ9Y3D5 142 aaKnown RBP12.42□□□□□ -0.42
USF1-202ENST00000368020 PHF3Q92576 2039 aaKnown RBP12.42□□□□□ -0.42
USF1-202ENST00000368020 MEIKINA0A087WXM9 373 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 OR2M5A3KFT3 312 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 CDRT15L2A8MXV6 281 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 H3BSH0 61 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 P2RY10O00398 339 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 LDLRAD4O15165 306 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 GMDSO60547 372 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 BPNT1O95861 308 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 TMIGD3P0DMS9 266 aaPredicted RBP12.42□□□□□ -0.42
USF1-202ENST00000368020 ZNF20P17024 532 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 MSR1P21757 451 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 TCEA1P23193 301 aaKnown RBP12.42□□□□□ -0.42
USF1-202ENST00000368020 CTSSP25774 331 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 GSK3AP49840 483 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 CLDN17P56750 224 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 TAS2R19P59542 299 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 SFRP4Q6FHJ7 346 aaPredicted RBP12.42□□□□□ -0.42
USF1-202ENST00000368020 H3F3CQ6NXT2 135 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 ZNF813Q6ZN06 617 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 FOXL2NBQ6ZUU3 175 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 PPP1R32Q7Z5V6 425 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 WDFY1Q8IWB7 410 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 OR11H7Q8NGC8 314 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 OR10S1Q8NGN2 331 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 GCDHQ92947 438 aaPredicted RBP12.42□□□□□ -0.42
USF1-202ENST00000368020 TMEM54Q969K7 222 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 PPP1R14AQ96A00 147 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms