RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 F5H5K5 113 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 H3BSH0 61 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 CDRT1O95170 752 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 CALRP27797 417 aaKnown RBP16.25■□□□□ 0.19
CLN3-206ENST00000360019 SDC2P34741 201 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 ZNF121P58317 390 aaPredicted RBP16.25■□□□□ 0.19
CLN3-206ENST00000360019 BCL2L15Q5TBC7 163 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 UNQ9370/PRO34162Q6UXP9 181 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 PRSS45Q7RTY3 260 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 GABRG1Q8N1C3 465 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 ZNF610Q8N9Z0 462 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 OR1F12Q8NHA8 337 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 SLIRPQ9GZT3 109 aaKnown RBP16.25■□□□□ 0.19
CLN3-206ENST00000360019 PBOV1Q9GZY1 135 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 NOX3Q9HBY0 568 aa16.25■□□□□ 0.19
CLN3-206ENST00000360019 ACOD1A6NK06 481 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 ZNF879B4DU55 563 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 GATBO75879 557 aaKnown RBP16.24■□□□□ 0.19
CLN3-206ENST00000360019 LYZL6O75951 148 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 TTRP02766 147 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 CLEC2LP0C7M8 214 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 COX5AP20674 150 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 MXD1Q05195 221 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 RBPJQ06330 500 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 KRTAP27-1Q3LI81 207 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 PABPC1L2AQ5JQF8 200 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 SFRP5Q5T4F7 317 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 NAA40Q86UY6 237 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 ZNF283Q8N7M2 679 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 TSC22D3Q99576 134 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 MOB1AQ9H8S9 216 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 NUFIP1Q9UHK0 495 aaKnown RBP16.24■□□□□ 0.19
CLN3-206ENST00000360019 SH3BGRL2Q9UJC5 107 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 SHANK1Q9Y566 2161 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 POLEQ07864 2286 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 PIN1P1O15428 100 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 UCHL1P09936 223 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 OCM2P0CE71 109 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 HTR5AP47898 357 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 TBRG1Q3YBR2 411 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 Q499Y3 187 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 ELMOD2Q8IZ81 293 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 ZNF433Q8N7K0 673 aaPredicted RBP16.24■□□□□ 0.19
CLN3-206ENST00000360019 CPEB3Q8NE35 698 aaKnown RBP16.24■□□□□ 0.19
CLN3-206ENST00000360019 GPR148Q8TDV2 347 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 ORAI1Q96D31 301 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 DERL3Q96Q80 235 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 MED18Q9BUE0 208 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 RNF121Q9H920 327 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 SNTG1Q9NSN8 517 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 ZNF319Q9P2F9 582 aa16.24■□□□□ 0.19
CLN3-206ENST00000360019 M0R135 149 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 RAD51DO75771 328 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 IL1AP01583 271 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 ISG15P05161 165 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 HGFACQ04756 655 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 PMPCAQ10713 525 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 ECH1Q13011 328 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 DGUOKQ16854 277 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 NCCRP1Q6ZVX7 275 aaPredicted RBP16.23■□□□□ 0.19
CLN3-206ENST00000360019 OR8B12Q8NGG6 310 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 SPTSSAQ969W0 71 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 ZNF799Q96GE5 643 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 SFXN3Q9BWM7 321 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 BARHL1Q9BZE3 327 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 TPK1Q9H3S4 243 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 NOX4Q9NPH5 578 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 SLC17A5Q9NRA2 495 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 CCDC59Q9P031 241 aaKnown RBP16.23■□□□□ 0.19
CLN3-206ENST00000360019 N6AMT1Q9Y5N5 214 aa16.23■□□□□ 0.19
CLN3-206ENST00000360019 LOC107986453A0A1B0GWG9 222 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 SMIM30A4D0T7 59 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 C5orf63A6NC05 138 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 E9PLN8 166 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 P2RY10O00398 339 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 ANXA2P07355 339 aaKnown RBP16.22■□□□□ 0.19
CLN3-206ENST00000360019 ACSM4P0C7M7 580 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 UBCP0CG48 685 aaKnown RBP16.22■□□□□ 0.19
CLN3-206ENST00000360019 CD79AP11912 226 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 SOX2P48431 317 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 TGFBR3Q03167 851 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 LSAMPQ13449 338 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 TSC22D1Q15714 1073 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 GABRA6Q16445 453 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 PAMR1Q6UXH9 720 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 ZNF704Q6ZNC4 412 aaPredicted RBP16.22■□□□□ 0.19
CLN3-206ENST00000360019 FAM57BQ71RH2 274 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 SLC25A46Q96AG3 418 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 DACH2Q96NX9 599 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 SLC24A3Q9HC58 644 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 B3GNT2Q9NY97 397 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 A0A0G2JNJ9 132 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 CASKO14936 926 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 ACHEP22303 614 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 SLC6A9P48067 706 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 MTNR1BP49286 362 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 RAB1AP62820 205 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 ST6GALNAC3Q8NDV1 305 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 Q9UFV3 132 aa16.22■□□□□ 0.19
CLN3-206ENST00000360019 NBASA2RRP1 2371 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms