RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 A0A087WUU8 490 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 IGKV1D-43A0A0B4J1Z2 117 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 CENPVL3A0A0U1RRI6 287 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 EFCAB9A8MZ26 197 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 J3KTA2 159 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 NME4O00746 187 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 FFAR1O14842 300 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 SURF4O15260 269 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 CYB5R3P00387 301 aaPredicted RBP13.16□□□□□ -0.3
DDX55-202ENST00000354291 CST2P09228 141 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 FUT4P22083 530 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 PITPNBP48739 271 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 ARHGDIAP52565 204 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 PCBD1P61457 104 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 DHRS7BQ6IAN0 325 aaPredicted RBP13.16□□□□□ -0.3
DDX55-202ENST00000354291 C8orf82Q6P1X6 216 aaPredicted RBP13.16□□□□□ -0.3
DDX55-202ENST00000354291 CCBE1Q6UXH8 406 aaPredicted RBP13.16□□□□□ -0.3
DDX55-202ENST00000354291 Q6ZR03 302 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 MBOAT2Q6ZWT7 520 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 VASH1Q7L8A9 365 aaPredicted RBP13.16□□□□□ -0.3
DDX55-202ENST00000354291 NLRC3Q7RTR2 1065 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 CYP4Z1Q86W10 505 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 C11orf44Q8N8P7 122 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 LRRC75AQ8NAA5 344 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 ZNF420Q8TAQ5 688 aaPredicted RBP13.16□□□□□ -0.3
DDX55-202ENST00000354291 CMTM5Q96DZ9 223 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 HSH2DQ96JZ2 352 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 TMEM246Q9BRR3 403 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 TRIM15Q9C019 465 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 ANKRD19PQ9H560 264 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 GCM1Q9NP62 436 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 GMPR2Q9P2T1 348 aaKnown RBP13.16□□□□□ -0.3
DDX55-202ENST00000354291 CLN8Q9UBY8 286 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 TIMM10BQ9Y5J6 103 aa13.16□□□□□ -0.3
DDX55-202ENST00000354291 P2RY10O00398 339 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 TOX4O94842 621 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 SERPINA1P01009 418 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 GSK3BP49841 420 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 MMP16P51512 607 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 ERVK-25P63136 954 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 PSG4Q00888 419 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 FHL1Q13642 323 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 TMPRSS11FQ6ZWK6 438 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 IGFN1Q86VF2 1251 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 FAM162AQ96A26 154 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 ITPKCQ96DU7 683 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 C4orf45Q96LM5 186 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 KCTD14Q9BQ13 255 aaPredicted RBP13.15□□□□□ -0.3
DDX55-202ENST00000354291 OR2H1Q9GZK4 316 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 NDEL1Q9GZM8 345 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 DPAGT1Q9H3H5 408 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 NMNAT1Q9HAN9 279 aaPredicted RBP13.15□□□□□ -0.3
DDX55-202ENST00000354291 ELOVL3Q9HB03 270 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 GRHPRQ9UBQ7 328 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 RPS6KA6Q9UK32 745 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 DNAH9Q9NYC9 4486 aa13.15□□□□□ -0.3
DDX55-202ENST00000354291 A0A0U1RQK1 487 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 H3BSA7 217 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 GPR37O15354 613 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 AHCYL1O43865 530 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 MPIG6BO95866 241 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 LAP3P28838 519 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 RPL4P36578 427 aaKnown RBP13.14□□□□□ -0.31
DDX55-202ENST00000354291 CFHR2P36980 270 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 NUDT2P50583 147 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 DBPQ10586 325 aaPredicted RBP13.14□□□□□ -0.31
DDX55-202ENST00000354291 HERPUD1Q15011 391 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 ZBED5Q49AG3 693 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 TBPL2Q6SJ96 375 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 ARL9Q6T311 187 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 FOXL2NBQ6ZUU3 175 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 SYT9Q86SS6 491 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 CLDN22Q8N7P3 220 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 ATG16L2Q8NAA4 619 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 SCCPDHQ8NBX0 429 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 FAM156AQ8NDB6 213 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 WACQ9BTA9 647 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 TMEM5Q9Y2B1 443 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 FAM32AQ9Y421 112 aaKnown RBP13.14□□□□□ -0.31
DDX55-202ENST00000354291 ENPP4Q9Y6X5 453 aa13.14□□□□□ -0.31
DDX55-202ENST00000354291 IGHV3-64DA0A0J9YX35 117 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 A0A1W2PPL8 197 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 C12orf71A8MTZ7 269 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 C22orf46C9J442 243 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 XKRYO14609 159 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 CDC42EP2O14613 210 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 ENSAO43768 121 aaKnown RBP13.13□□□□□ -0.31
DDX55-202ENST00000354291 GMNNO75496 209 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 TSPAN9O75954 239 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 CD14P08571 375 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 GSTM3P21266 225 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 MSR1P21757 451 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 FAM201AQ5SY85 155 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 WDR25Q64LD2 544 aaPredicted RBP13.13□□□□□ -0.31
DDX55-202ENST00000354291 LYPD2Q6UXB3 125 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 PDZD9Q8IXQ8 264 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 OR13C2Q8NGS9 318 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 LRTOMTQ8WZ04 291 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 LHX4Q969G2 390 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 CMBLQ96DG6 245 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms