RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 MARCH1Q8TCQ1 289 aa17.72■□□□□ 0.43
CRLF3-201ENST00000324238 SLC25A21Q9BQT8 299 aaPredicted RBP17.72■□□□□ 0.43
CRLF3-201ENST00000324238 AIFM2Q9BRQ8 373 aa17.72■□□□□ 0.43
CRLF3-201ENST00000324238 BANF2Q9H503 90 aa17.72■□□□□ 0.43
CRLF3-201ENST00000324238 FN3KRPQ9HA64 309 aa17.72■□□□□ 0.43
CRLF3-201ENST00000324238 BARX1Q9HBU1 254 aaPredicted RBP17.72■□□□□ 0.43
CRLF3-201ENST00000324238 CTSFQ9UBX1 484 aa17.72■□□□□ 0.43
CRLF3-201ENST00000324238 PCDHB10Q9UN67 800 aa17.72■□□□□ 0.43
CRLF3-201ENST00000324238 STK17BO94768 372 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 ROM1Q03395 351 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 PAQR8Q8TEZ7 354 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 MAFIPQ8WZ33 124 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 C8orf33Q9H7E9 229 aaPredicted RBP17.71■□□□□ 0.43
CRLF3-201ENST00000324238 R4GMQ9 66 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 H2BFMP0C1H6 154 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 BDKRB2P30411 391 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 FDX2Q6P4F2 183 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 ARMC10Q8N2F6 343 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 SMRP1Q8NCR6 262 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 OR1L3Q8NH93 324 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 WWTR1Q9GZV5 400 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 KCNK7Q9Y2U2 307 aa17.71■□□□□ 0.43
CRLF3-201ENST00000324238 A0A0B4J2A0 478 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 MPTX1A8MV57 137 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 ZNF217O75362 1048 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 PGAM2P15259 253 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 ABOP16442 354 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 CNR1P21554 472 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 FBXW4P57775 412 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 GUCA2BQ16661 112 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 KCNRGQ8N5I3 272 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 SHPKQ9UHJ6 478 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 A0A1B0GTI1 187 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 C9orf170A2RU37 121 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 MS4A18H0YCH9 400 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 DXOO77932 396 aaKnown RBP17.7■□□□□ 0.42
CRLF3-201ENST00000324238 ZBTB25P24278 435 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 CDAP32320 146 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 SLC9A3R2Q15599 337 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 MS4A18Q3C1V0 323 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 CLVS2Q5SYC1 327 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.7■□□□□ 0.42
CRLF3-201ENST00000324238 CARD17Q5XLA6 110 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 ZNF101Q8IZC7 436 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 C5orf34Q96MH7 638 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 ALX4Q9H161 411 aaPredicted RBP17.7■□□□□ 0.42
CRLF3-201ENST00000324238 SEC61A2Q9H9S3 476 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 SLC39A1Q9NY26 324 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 METTL12A8MUP2 240 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 A8MVM7 634 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 TSPAN2O60636 221 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 UBBP0CG47 229 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 UBCP0CG48 685 aaKnown RBP17.7■□□□□ 0.42
CRLF3-201ENST00000324238 PRKACAP17612 351 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 CASRP41180 1078 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 SLC6A8P48029 635 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 SCAND1P57086 179 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 RPS27AP62979 156 aaKnown RBP17.7■□□□□ 0.42
CRLF3-201ENST00000324238 UBA52P62987 128 aaKnown RBP17.7■□□□□ 0.42
CRLF3-201ENST00000324238 INPP5JQ15735 1006 aaPredicted RBP17.7■□□□□ 0.42
CRLF3-201ENST00000324238 TMEM104Q8NE00 496 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 SLC25A32Q9H2D1 315 aa17.7■□□□□ 0.42
CRLF3-201ENST00000324238 IGHV1OR15-9A0A0B4J2B8 117 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 ALG1L2C9J202 215 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 NPIPA5E9PKD4 350 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 TMEM127O75204 238 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 VSIG8P0DPA2 414 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 NPY4RP50391 375 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 POLR2HP52434 150 aaKnown RBP17.69■□□□□ 0.42
CRLF3-201ENST00000324238 PPIAP62937 165 aaKnown RBP17.69■□□□□ 0.42
CRLF3-201ENST00000324238 TMPRSS9Q7Z410 1059 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 OR5D18Q8NGL1 313 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 ST7LQ8TDW4 575 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 VSX1Q9NZR4 365 aaPredicted RBP17.69■□□□□ 0.42
CRLF3-201ENST00000324238 NPIPA1Q9UND3 350 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 MYO7BQ6PIF6 2116 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 DISC1C4P0D8 188 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 LDLRAD4O15165 306 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 ADAP1O75689 374 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 SLC26A5P58743 744 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 SNTB1Q13884 538 aaKnown RBP17.69■□□□□ 0.42
CRLF3-201ENST00000324238 ZNF260Q3ZCT1 412 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 RAB12Q6IQ22 244 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 ANGPTL5Q86XS5 388 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 CBLN2Q8IUK8 224 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 FOXRED2Q8IWF2 684 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 ESX1Q8N693 406 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 NPRL2Q8WTW4 380 aa17.69■□□□□ 0.42
CRLF3-201ENST00000324238 A0A0D9SG52 128 aa17.68■□□□□ 0.42
CRLF3-201ENST00000324238 OR6C76A6NM76 312 aa17.68■□□□□ 0.42
CRLF3-201ENST00000324238 BCL2L11O43521 198 aa17.68■□□□□ 0.42
CRLF3-201ENST00000324238 NPIPB7O75200 414 aa17.68■□□□□ 0.42
CRLF3-201ENST00000324238 SERPINF1P36955 418 aa17.68■□□□□ 0.42
CRLF3-201ENST00000324238 CFHR1Q03591 330 aa17.68■□□□□ 0.42
CRLF3-201ENST00000324238 MOB3CQ70IA8 216 aa17.68■□□□□ 0.42
CRLF3-201ENST00000324238 LYG2Q86SG7 212 aa17.68■□□□□ 0.42
CRLF3-201ENST00000324238 GKN2Q86XP6 184 aa17.68■□□□□ 0.42
CRLF3-201ENST00000324238 IQCF2Q8IXL9 164 aa17.68■□□□□ 0.42
CRLF3-201ENST00000324238 ZNF248Q8NDW4 579 aa17.68■□□□□ 0.42
CRLF3-201ENST00000324238 OR51E1Q8TCB6 317 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms