RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ECH1Q13011 328 aa13.16□□□□□ -0.3
COL6A2-202ENST00000310645 FRMD1Q8N878 549 aa13.16□□□□□ -0.3
COL6A2-202ENST00000310645 NECAB3Q96P71 396 aaPredicted RBP13.16□□□□□ -0.3
COL6A2-202ENST00000310645 SMIM3Q9BZL3 60 aa13.16□□□□□ -0.3
COL6A2-202ENST00000310645 LOC101059948A0A1B0GTJ6 334 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 LOC107986453A0A1B0GWG9 222 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 RAB27BO00194 218 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 EIF1BO60739 113 aaKnown RBP13.15□□□□□ -0.3
COL6A2-202ENST00000310645 S100A8P05109 93 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 SFTPBP07988 381 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 HLA-GP17693 338 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 EIF1P41567 113 aaKnown RBP13.15□□□□□ -0.3
COL6A2-202ENST00000310645 C2orf27AQ580R0 203 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 KCTD18Q6PI47 426 aaPredicted RBP13.15□□□□□ -0.3
COL6A2-202ENST00000310645 DHRS11Q6UWP2 260 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 FAM160A2Q8N612 972 aaPredicted RBP13.15□□□□□ -0.3
COL6A2-202ENST00000310645 ZNF615Q8N8J6 731 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 HIST1H2BAQ96A08 127 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 HHLA2Q9UM44 414 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 hCG_1809904A0A1W2PP81 198 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 A0A1W2PR64 198 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 A0A1W2PRV1 198 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 PRR19A6NJB7 356 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 PHYHO14832 338 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 HOXB5P09067 269 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 PPM1FP49593 454 aaPredicted RBP13.15□□□□□ -0.3
COL6A2-202ENST00000310645 RAB38P57729 211 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 ZNF260Q3ZCT1 412 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 ADAM5Q6NVV9 412 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 COX15Q7KZN9 410 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 ZDHHC22Q8N966 263 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 FGGYQ96C11 551 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 ZNF285Q96NJ3 590 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 DGAT2Q96PD7 388 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 CNTD2Q9H8S5 307 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 SEC61A2Q9H9S3 476 aa13.15□□□□□ -0.3
COL6A2-202ENST00000310645 MRPL22Q9NWU5 206 aaKnown RBP13.15□□□□□ -0.3
COL6A2-202ENST00000310645 C5orf52A6NGY3 159 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 HEXAP06865 529 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 CTLA4P16410 223 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 RAB32Q13637 225 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 OR4K15Q8NH41 348 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 THRSPQ92748 146 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 OR10A5Q9H207 317 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 TINAGQ9UJW2 476 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 MYO9BQ13459 2157 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 HTR3BO95264 441 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 ACKR1Q16570 336 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 DMRTC1Q5HYR2 192 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 C5orf46Q6UWT4 87 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 ZNF600Q6ZNG1 722 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 FAM60AQ9NP50 221 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 C5AR1P21730 350 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 CXCR1P25024 350 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 HTRA3P83110 453 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 TDGQ13569 410 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 GALNTL5Q7Z4T8 443 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 KIRREL1Q96J84 757 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 TAF9BQ9HBM6 251 aa13.14□□□□□ -0.31
COL6A2-202ENST00000310645 A0A1B0GV50 99 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 A0A1W2PPH5 198 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 NUDT19A8MXV4 375 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 SCDO00767 359 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 FOXS1O43638 330 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 CYCSP99999 105 aaKnown RBP13.13□□□□□ -0.31
COL6A2-202ENST00000310645 NAAAQ02083 359 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 TSC22D1Q15714 1073 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 TOMM34Q15785 309 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-202ENST00000310645 PTCRAQ6ISU1 281 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-202ENST00000310645 ZNF101Q8IZC7 436 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 OR52N4Q8NGI2 321 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 AQP3Q92482 292 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 IP6K3Q96PC2 410 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 RNF208Q9H0X6 261 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 PTGES2Q9H7Z7 377 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 ATXN7L1Q9ULK2 861 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-202ENST00000310645 NUP210LQ5VU65 1888 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 ASCC3Q8N3C0 2202 aaKnown RBP13.13□□□□□ -0.31
COL6A2-202ENST00000310645 TNFSF14O43557 240 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 HCRTR2O43614 444 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 WISP1O95388 367 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 TXNDC12O95881 172 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 OR8U9P0C7N5 309 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 RAB6AP20340 208 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 GJA4P35212 333 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 TMEM31Q5JXX7 168 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 OR8U1Q8NH10 309 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 OR10C1Q96KK4 312 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 ADOQ96SZ5 270 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 COA3Q9Y2R0 106 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-202ENST00000310645 TMEM269A0A1B0GVZ9 245 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 CDC14CA4D256 554 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 MEGF11A6BM72 1044 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 ARG1P05089 322 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 INSM1Q01101 510 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-202ENST00000310645 TOMM20Q15388 145 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 ACER2Q5QJU3 275 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 Q6ZRG5 221 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 CATSPERDQ86XM0 798 aa13.13□□□□□ -0.31
COL6A2-202ENST00000310645 BAHD1Q8TBE0 780 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms