RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 AMY2AP04746 511 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 CD37P11049 281 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 ZNF43P17038 809 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 HSD11B1P28845 292 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 TAS2R19P59542 299 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 C1QTNF12Q5T7M4 302 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 IDO2Q6ZQW0 420 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 OR2AJ1Q8NGZ0 328 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 TNFAIP8L1Q8WVP5 186 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 EDAQ92838 391 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 NAT6Q93015 286 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 KLK13Q9UKR3 277 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 PTRH2Q9Y3E5 179 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 RTTNQ86VV8 2226 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 LOC390937A0A1W2PQ73 354 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 SMAD9O15198 467 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 OR2A4O95047 310 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 ONECUT2O95948 504 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 QDPRP09417 244 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 ZNF35P13682 527 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 CLDN6P56747 220 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 TOMM20Q15388 145 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 TAF13Q15543 124 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 GFOD2Q3B7J2 385 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 FAM198BQ6UWH4 519 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 RTN4RL2Q86UN3 420 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 PAQR4Q8N4S7 273 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 OR1M1Q8NGA1 313 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 GNRHR2Q96P88 292 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 OR2A7Q96R45 310 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 SLX1AQ9BQ83 275 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 GPN3Q9UHW5 284 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 ARPC4-TTLL3A0A0A6YYG9 625 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 PLSCR5A0PG75 271 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 SULT2B1O00204 365 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 CYB5AP00167 134 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 UMODP07911 640 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 ABOP16442 354 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 RAP2BP61225 183 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 UNC119Q13432 240 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 NKPD1Q17RQ9 610 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 SCGB2B2Q4G0G5 96 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 FAM109AQ8N4B1 249 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 NKAIN3Q8N8D7 197 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 CHST4Q8NCG5 386 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 JSRP1Q96MG2 331 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 ZNF319Q9P2F9 582 aa16.28■□□□□ 0.2
SHKBP1-201ENST00000291842 LOC100509620A0A075B734 347 aa16.27■□□□□ 0.2
SHKBP1-201ENST00000291842 IGHV3-15A0A0B4J1V0 119 aa16.27■□□□□ 0.2
SHKBP1-201ENST00000291842 OPCMLQ14982 345 aa16.27■□□□□ 0.2
SHKBP1-201ENST00000291842 SLC22A6Q4U2R8 563 aa16.27■□□□□ 0.2
SHKBP1-201ENST00000291842 CD163Q86VB7 1156 aa16.27■□□□□ 0.2
SHKBP1-201ENST00000291842 OR2AK2Q8NG84 335 aa16.27■□□□□ 0.2
SHKBP1-201ENST00000291842 IFNA7P01567 189 aa16.27■□□□□ 0.19
SHKBP1-201ENST00000291842 FGF5P12034 268 aa16.27■□□□□ 0.19
SHKBP1-201ENST00000291842 GPR85P60893 370 aa16.27■□□□□ 0.19
SHKBP1-201ENST00000291842 C17orf107Q6ZR85 190 aa16.27■□□□□ 0.19
SHKBP1-201ENST00000291842 ABHD12BQ7Z5M8 362 aaPredicted RBP16.27■□□□□ 0.19
SHKBP1-201ENST00000291842 GVQW1Q8N7I0 195 aa16.27■□□□□ 0.19
SHKBP1-201ENST00000291842 FADS6Q8N9I5 356 aa16.27■□□□□ 0.19
SHKBP1-201ENST00000291842 TMEM229BQ8NBD8 167 aa16.27■□□□□ 0.19
SHKBP1-201ENST00000291842 OXGR1Q96P68 337 aa16.27■□□□□ 0.19
SHKBP1-201ENST00000291842 SLC5A6Q9Y289 635 aa16.27■□□□□ 0.19
SHKBP1-201ENST00000291842 IGHV1-45A0A0A0MS14 117 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 A0A1B0GTI1 187 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 ZNF726A6NNF4 738 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 ZNF736B4DX44 427 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 ZNF878C9JN71 531 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 L7N2F9 121 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 TP53I11O14683 189 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 ARPC5O15511 151 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 LIPCP11150 499 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 NFYAP23511 347 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 P2RX3P56373 397 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 CLDN17P56750 224 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 ZNF121P58317 390 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 GABREP78334 506 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 ESCO2Q56NI9 601 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 C11orf88Q6PI97 169 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 SLC25A47Q6Q0C1 308 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 OR5D14Q8NGL3 314 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 RADILQ96JH8 1075 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 FAM71F1Q96KD3 344 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 UBQLN2Q9UHD9 624 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 OPN4Q9UHM6 478 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 D6RAR5 112 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 RAB27BO00194 218 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 SULT1C2O00338 296 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 ITGB2P05107 769 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 KLK3P07288 261 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 VSIG8P0DPA2 414 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 CCL3P10147 92 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 OR6X1Q8NH79 312 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 NUDCD2Q8WVJ2 157 aa16.26■□□□□ 0.19
SHKBP1-201ENST00000291842 TMEM82A0PJX8 343 aa16.25■□□□□ 0.19
SHKBP1-201ENST00000291842 RGS11O94810 467 aa16.25■□□□□ 0.19
SHKBP1-201ENST00000291842 GNB3P16520 340 aa16.25■□□□□ 0.19
SHKBP1-201ENST00000291842 ZNF20P17024 532 aa16.25■□□□□ 0.19
SHKBP1-201ENST00000291842 RAB3AP20336 220 aa16.25■□□□□ 0.19
SHKBP1-201ENST00000291842 SSBP1Q04837 148 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms