RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 IFNL4K9M1U5 179 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 RER1O15258 196 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 NOS3P29474 1203 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 RRM2P31350 389 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 GSSP48637 474 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 CENPAP49450 140 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 HMGA2P52926 109 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 COX10Q12887 443 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 TSPAN31Q12999 210 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 RPL13AP3Q6NVV1 102 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 LEG1Q6P5S2 330 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 FBXW12Q6X9E4 464 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 ZDHHC21Q8IVQ6 265 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 DEFB107AQ8IZN7 70 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 OR6V1Q8N148 313 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 NPTNQ9Y639 398 aa16.14■□□□□ 0.17
CCDC28A-203ENST00000617445 MSX2P35548 267 aaPredicted RBP16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 MXRA7P84157 204 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 ECH1Q13011 328 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 ZBTB46Q86UZ6 589 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 ARHGAP24Q8N264 748 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 ZNF283Q8N7M2 679 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 OR2Z1Q8NG97 314 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 ST7LQ8TDW4 575 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 ZFAND2BQ8WV99 257 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 SLC7A6Q92536 515 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 POP5Q969H6 163 aaKnown RBP16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 TSSK2Q96PF2 358 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 NMNAT3Q96T66 252 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 POFUT1Q9H488 388 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 OCEL1Q9H607 264 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 SRA1Q9HD15 236 aaKnown RBP16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 TMEM106BQ9NUM4 274 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 ACTR3BQ9P1U1 418 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 LHFPL6Q9Y693 200 aa16.13■□□□□ 0.17
CCDC28A-203ENST00000617445 PPIAL4EA0A075B759 164 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 PPIAL4CA0A0B4J2A2 164 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 ISPDA4D126 451 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 PPIAL4DF5H284 164 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 DCTN6O00399 190 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 PPIAL4FP0DN26 164 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 HIST1H1CP16403 213 aaKnown RBP16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 DCAF12L2Q5VW00 463 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 Q6ZR03 302 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 SPICQ8N5J4 248 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 SLC26A10Q8NG04 563 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 OR13G1Q8NGZ3 307 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 OR4K13Q8NH42 304 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 ZNF418Q8TF45 676 aaPredicted RBP16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 CDADC1Q9BWV3 514 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 TRIM15Q9C019 465 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 KCNG2Q9UJ96 466 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 PPP1R3CQ9UQK1 317 aa16.12■□□□□ 0.17
CCDC28A-203ENST00000617445 FOXH1O75593 365 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 IGHV2-70P01814 119 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 DBHP09172 617 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 CPT2P23786 658 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 SRSF2Q01130 221 aaKnown RBP16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 TMEM155Q4W5P6 130 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 ZNF620Q6ZNG0 422 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 USP43Q70EL4 1123 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 LRRC28Q86X40 367 aaPredicted RBP16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 KLHL36Q8N4N3 616 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 OR8G5Q8NG78 346 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 OR52L1Q8NGH7 329 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 OR2AJ1Q8NGZ0 328 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 ZNF582Q96NG8 517 aaPredicted RBP16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 MUC13Q9H3R2 512 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 RPRD1BQ9NQG5 326 aaKnown RBP16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 PCDHB10Q9UN67 800 aa16.11■□□□□ 0.17
CCDC28A-203ENST00000617445 ARHGAP32A7KAX9 2087 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 SBK2P0C263 348 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 SELEP16581 610 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 MEP1BQ16820 701 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 SPRNQ5BIV9 151 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 OTPQ5XKR4 325 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 SLC18B1Q6NT16 456 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 PGBD2Q6P3X8 592 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 COLCA1Q6ZS62 124 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 C1QL2Q7Z5L3 287 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 NANPQ8TBE9 248 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 PITX2Q99697 317 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 HCAR1Q9BXC0 346 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 TMPRSS13Q9BYE2 586 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 UBAP1Q9NZ09 502 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 PTTG3PQ9NZH4 202 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 CYB5R1Q9UHQ9 305 aa16.1■□□□□ 0.17
CCDC28A-203ENST00000617445 OR6C68A6NDL8 312 aa16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 TNFRSF11BO00300 401 aa16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 GPANK1O95872 356 aa16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 HLA-DQA2P01906 255 aa16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 SRP9P49458 86 aaKnown RBP16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 KRTAP27-1Q3LI81 207 aa16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 CORO6Q6QEF8 472 aa16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 C1orf229Q6ZS94 237 aaPredicted RBP16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 ATG16L2Q8NAA4 619 aa16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 OR52E2Q8NGJ4 325 aa16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 ITLN1Q8WWA0 313 aa16.09■□□□□ 0.17
CCDC28A-203ENST00000617445 OR2V2Q96R30 315 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms