RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 TSSK2Q96PF2 358 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 PITX2Q99697 317 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 SYT3Q9BQG1 590 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 RACGAP1Q9H0H5 632 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 SYT4Q9H2B2 425 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 RASSF4Q9H2L5 321 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 TPK1Q9H3S4 243 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 FN3KQ9H479 309 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 CHODLQ9H9P2 273 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 SIAEQ9HAT2 523 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 SRA1Q9HD15 236 aaKnown RBP11.43□□□□□ -0.58
CTSA-213ENST00000606782 MYEF2Q9P2K5 600 aaKnown RBP11.43□□□□□ -0.58
CTSA-213ENST00000606782 UGT2A1Q9Y4X1 527 aa11.43□□□□□ -0.58
CTSA-213ENST00000606782 IGLV1-36A0A0B4J1U3 117 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 RIIAD1A6NNX1 92 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 PRKYO43930 277 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 SLC16A7O60669 478 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 KHDRBS3O75525 346 aaKnown RBP11.42□□□□□ -0.58
CTSA-213ENST00000606782 HPXP02790 462 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 SRD5A1P18405 259 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 COL8A2P25067 703 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 IL2RGP31785 369 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 ALDH3B1P43353 468 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 CDH15P55291 814 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 TMEM33P57088 247 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 DHRSXQ8N5I4 330 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 TCEANCQ8N8B7 351 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 CYB561A3Q8NBI2 242 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 OR1J2Q8NGS2 313 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 ZNRF4Q8WWF5 429 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 NSMAFQ92636 917 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 RDH5Q92781 318 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 UBE2FQ969M7 185 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 VCXQ9H320 206 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 VCX3BQ9H321 246 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 RPRD1BQ9NQG5 326 aaKnown RBP11.42□□□□□ -0.58
CTSA-213ENST00000606782 NKIRAS2Q9NYR9 191 aa11.42□□□□□ -0.58
CTSA-213ENST00000606782 COA3Q9Y2R0 106 aaPredicted RBP11.42□□□□□ -0.58
CTSA-213ENST00000606782 LYNX1G3V0Z9 82 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 SCG5P05408 212 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 LYNX1P0DP58 116 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 ZNF3P17036 446 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 HNF1AP20823 631 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 ACHEP22303 614 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 LAP3P28838 519 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 RAD52P43351 418 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 UCP2P55851 309 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 CDC42P60953 191 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 PLP2Q04941 152 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 KCNMB1Q16558 191 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 CR1LQ2VPA4 569 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 SLC25A30Q5SVS4 291 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 FAM27BQ5VT28 67 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 AADACL4Q5VUY2 407 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 TTC23Q5W5X9 447 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 RGS7BPQ6MZT1 257 aaPredicted RBP11.41□□□□□ -0.58
CTSA-213ENST00000606782 DNM1P34Q6PK57 102 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 CPOQ8IVL8 374 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 LINC01356Q8N9X3 169 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 OR8J1Q8NGP2 316 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 TMEM163Q8TC26 289 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 TFAP2CQ92754 450 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 NABP1Q96AH0 204 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 PLEKHA8Q96JA3 519 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 HCAR1Q9BXC0 346 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 PRRG3Q9BZD7 231 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 BCL2L14Q9BZR8 327 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 RNF121Q9H920 327 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 CDH20Q9HBT6 801 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 HINT3Q9NQE9 182 aaKnown RBP11.41□□□□□ -0.58
CTSA-213ENST00000606782 DUSP13Q9UII6 198 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 GMPPBQ9Y5P6 360 aa11.41□□□□□ -0.58
CTSA-213ENST00000606782 IQCMA0A1B0GVH7 501 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 FAM183AA6NL82 134 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 C17orf100A8MU93 164 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 PRR23D1E9PI22 279 aaPredicted RBP11.4□□□□□ -0.58
CTSA-213ENST00000606782 H0YAE9 185 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 ICMTO60725 284 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 RP2O75695 350 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 PRR23D2P0DMB1 279 aaPredicted RBP11.4□□□□□ -0.58
CTSA-213ENST00000606782 CCL2P13500 99 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 SPI1P17947 270 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 PAICSP22234 425 aaKnown RBP11.4□□□□□ -0.58
CTSA-213ENST00000606782 APEX1P27695 318 aaKnown RBP11.4□□□□□ -0.58
CTSA-213ENST00000606782 CDAP32320 146 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 VHLP40337 213 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 SELENOVP59797 346 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 SNRPGP62308 76 aaKnown RBP11.4□□□□□ -0.58
CTSA-213ENST00000606782 DBPQ10586 325 aaPredicted RBP11.4□□□□□ -0.58
CTSA-213ENST00000606782 MAD2L1BPQ15013 274 aaPredicted RBP11.4□□□□□ -0.58
CTSA-213ENST00000606782 TBC1D28Q2M2D7 210 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 PLBD1Q6P4A8 553 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 GLB1L2Q8IW92 636 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 CPEB3Q8NE35 698 aaKnown RBP11.4□□□□□ -0.58
CTSA-213ENST00000606782 ZNF555Q8NEP9 628 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 OR2T4Q8NH00 348 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 RHOXF1Q8NHV9 184 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 SYNPRQ8TBG9 265 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 C11orf40Q8WZ69 217 aa11.4□□□□□ -0.58
CTSA-213ENST00000606782 IL4I1Q96RQ9 567 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms