RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 TMEM165Q9HC07 324 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 KRCC1Q9NPI7 259 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 NRIP3Q9NQ35 241 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 VSX1Q9NZR4 365 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 CMYA5Q8N3K9 4069 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 CEACAM18A8MTB9 384 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 GSTA4O15217 222 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 SLC16A7O60669 478 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 PTP4A3O75365 173 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 CTLA4P16410 223 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 CRABP1P29762 137 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 CD80P33681 288 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 RBMXP38159 391 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 YAP1P46937 504 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 MESTQ5EB52 335 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 CELF2-AS1Q8N7Q2 184 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 TAF15Q92804 592 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 NEIL1Q96FI4 390 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 COQ7Q99807 217 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 HDHD2Q9H0R4 259 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 DCAF16Q9NXF7 216 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 RHCGQ9UBD6 479 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 ASH2LQ9UBL3 628 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 NOP16Q9Y3C1 178 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 ADAM18Q9Y3Q7 739 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 FAM32AQ9Y421 112 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 CAPN7Q9Y6W3 813 aa14.95□□□□□ -0.02
SHKBP1-227ENST00000602011 KIR2DS1A0A191URI9 304 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 A0A1W2PRQ8 180 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 CXCR6O00574 342 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 ZNF682O95780 498 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 RPS2P15880 293 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 MMP16P51512 607 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 RPS6KA3P51812 740 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 GNB2P62879 340 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 PAX2Q02962 417 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 ECH1Q13011 328 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 KRR1Q13601 381 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 DGCR6Q14129 220 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 CCDC92Q53HC0 331 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 ZNF362Q5T0B9 420 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 C16orf87Q6PH81 154 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 DPY19L2P2Q6ZN68 376 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 VTCN1Q7Z7D3 282 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 SLC15A3Q8IY34 581 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 MEGF10Q96KG7 1140 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 SLC30A2Q9BRI3 323 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 HCAR1Q9BXC0 346 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 UNKLQ9H9P5 680 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 TMEM100Q9NV29 134 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 RPS6KA6Q9UK32 745 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 COA3Q9Y2R0 106 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 MMP24Q9Y5R2 645 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 SNX13Q9Y5W8 968 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 ENPP4Q9Y6X5 453 aa14.94□□□□□ -0.02
SHKBP1-227ENST00000602011 TANC2Q9HCD6 1990 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 IGHV2-70DA0A0C4DH43 119 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 A0A1B0GWJ7 208 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 IQCF6A8MYZ5 107 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 H7C1C5 153 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 J3KTA2 159 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 CDC42EP2O14613 210 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 TXNDC12O95881 172 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 IRF2P14316 349 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 GATA4P43694 442 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 LCN6P62502 163 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 HIST1H3AP68431 136 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 LIPEQ05469 1076 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 SLC9A3R2Q15599 337 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 OCLNQ16625 522 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 HIST2H3PS2Q5TEC6 136 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 C1orf94Q6P1W5 598 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 LEG1Q6P5S2 330 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 HIST2H3AQ71DI3 136 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 KLBQ86Z14 1044 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 PARP8Q8N3A8 854 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 OR8B3Q8NGG8 313 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 OR8B2Q96RD0 313 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 SLC22A4Q9H015 551 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 SYT4Q9H2B2 425 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 POFUT1Q9H488 388 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 PRDM13Q9H4Q3 707 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 CMTM6Q9NX76 183 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 SIGLEC7Q9Y286 467 aa14.93□□□□□ -0.02
SHKBP1-227ENST00000602011 IMPA2O14732 288 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 ATP8B1O43520 1251 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 PLATP00750 562 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 LIPFP07098 398 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 H1F0P07305 194 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 RHCEP18577 417 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 GPR4P46093 362 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 NPY4RP50391 375 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 SEC61A1P61619 476 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 DEFA6Q01524 100 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 KCNJ8Q15842 424 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 SLC36A3Q495N2 470 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 PDLIM3Q53GG5 364 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 OR2T2Q6IF00 324 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 TBPL2Q6SJ96 375 aa14.92□□□□□ -0.02
SHKBP1-227ENST00000602011 BCL6BQ8N143 479 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms