RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, human

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-215	ENST00000597649	OR52L1	Q8NGH7	329 aa		13.91	□□□□□ -0.18
SHKBP1-215	ENST00000597649	ZNF566	Q969W8	418 aa		13.91	□□□□□ -0.18
SHKBP1-215	ENST00000597649	TIMD4	Q96H15	378 aa		13.91	□□□□□ -0.18
SHKBP1-215	ENST00000597649	SLC25A44	Q96H78	314 aa	Predicted RBP	13.91	□□□□□ -0.18
SHKBP1-215	ENST00000597649	NIPSNAP1	Q9BPW8	284 aa		13.91	□□□□□ -0.18
SHKBP1-215	ENST00000597649	BCL2L14	Q9BZR8	327 aa		13.91	□□□□□ -0.18
SHKBP1-215	ENST00000597649	DCLRE1B	Q9H816	532 aa		13.91	□□□□□ -0.18
SHKBP1-215	ENST00000597649	DCAF16	Q9NXF7	216 aa		13.91	□□□□□ -0.18
SHKBP1-215	ENST00000597649	OAZ3	Q9UMX2	235 aa		13.91	□□□□□ -0.18
SHKBP1-215	ENST00000597649	TRAPPC2L	H3BP13	241 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	PGA4	P0DJD7	388 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	PGA3	P0DJD8	388 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	SLC6A6	P31641	620 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	MPV17	P39210	176 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	DAP3	P51398	398 aa	Known RBP	13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	TOP3A	Q13472	1001 aa	Predicted RBP	13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	TBC1D28	Q2M2D7	210 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	RFX4	Q33E94	735 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	SLC16A14	Q7RTX9	510 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	HDDC2	Q7Z4H3	204 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	IGFN1	Q86VF2	1251 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	OR1J1	Q8NGS3	322 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	DNAJC9	Q8WXX5	260 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	ELMOD3	Q96FG2	381 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	OR52D1	Q9H346	318 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	UBAP1	Q9NZ09	502 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	CDH10	Q9Y6N8	788 aa		13.9	□□□□□ -0.18
SHKBP1-215	ENST00000597649	PPIAL4E	A0A075B759	164 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	PPIAL4C	A0A0B4J2A2	164 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	PPIAL4D	F5H284	164 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649		H3BN98	237 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	FARS2	O95363	451 aa	Known RBP	13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	TSPAN19	P0C672	248 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	PPIAL4F	P0DN26	164 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	WNT5A	P41221	380 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	RPS6KA3	P51812	740 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	MOG	Q16653	247 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	HIST3H3	Q16695	136 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	MIDN	Q504T8	468 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	FAM209A	Q5JX71	171 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	SPATA46	Q5T0L3	261 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	THEM4	Q5T1C6	240 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	CD300LD	Q6UXZ3	194 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	RBMS3	Q6XE24	437 aa	Known RBP	13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	DPY19L2P2	Q6ZN68	376 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	ZNF620	Q6ZNG0	422 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	ZNF101	Q8IZC7	436 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	OR1J2	Q8NGS2	313 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	MCHR2	Q969V1	340 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	EME1	Q96AY2	570 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	MARS2	Q96GW9	593 aa	Known RBP	13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	SAMD8	Q96LT4	415 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	CIB1	Q99828	191 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	RBM4B	Q9BQ04	359 aa	Known RBP	13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	C9orf16	Q9BUW7	83 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	IFT27	Q9BW83	186 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	OSBPL10	Q9BXB5	764 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	GABARAPL1	Q9H0R8	117 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	C1orf198	Q9H425	327 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	EGLN3	Q9H6Z9	239 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	SMURF2	Q9HAU4	748 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	KRT84	Q9NSB2	600 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	TBC1D23	Q9NUY8	699 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	STX18	Q9P2W9	335 aa	Known RBP	13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	GRHPR	Q9UBQ7	328 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	IL20RA	Q9UHF4	553 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	PURG	Q9UJV8	347 aa	Known RBP	13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	NUP50	Q9UKX7	468 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	ORC6	Q9Y5N6	252 aa		13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	SOX21	Q9Y651	276 aa	Predicted RBP	13.89	□□□□□ -0.19
SHKBP1-215	ENST00000597649	ISPD	A4D126	451 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	ZSCAN5B	A6NJL1	495 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	SOX14	O95416	240 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	CD14	P08571	375 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	POU1F1	P28069	291 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	DAP	P51397	102 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	RPL27	P61353	136 aa	Known RBP	13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	ERVK-25	P63136	954 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	BAMBI	Q13145	260 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	FHL1	Q13642	323 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	SLC36A2	Q495M3	483 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	PABPC1L2A	Q5JQF8	200 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	FAHD1	Q6P587	224 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	ZBTB49	Q6ZSB9	765 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	DPPA2	Q7Z7J5	298 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	LRRC18	Q8N456	261 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	CLDN22	Q8N7P3	220 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	LRRC75A	Q8NAA5	344 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	TEX47	Q8TBZ9	253 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	TSSK6	Q9BXA6	273 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	MRPL13	Q9BYD1	178 aa	Known RBP	13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	TXNIP	Q9H3M7	391 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	PLEK2	Q9NYT0	353 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	KLHL21	Q9UJP4	597 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	RRP15	Q9Y3B9	282 aa	Known RBP	13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	IER3IP1	Q9Y5U9	82 aa		13.88	□□□□□ -0.19
SHKBP1-215	ENST00000597649	LOC100509620	A0A075B734	347 aa		13.87	□□□□□ -0.19
SHKBP1-215	ENST00000597649	IQCM	A0A1B0GVH7	501 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms