RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SDR9C7Q8NEX9 313 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 GJC3Q8NFK1 279 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 OR2Z1Q8NG97 314 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 OR52E2Q8NGJ4 325 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 OR2T29Q8NH02 315 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 SPATA3Q8NHX4 192 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 RAB1CQ92928 201 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 TMEM186Q96B77 213 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 CMBLQ96DG6 245 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 DIRC2Q96SL1 478 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 CHID1Q9BWS9 393 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 TRIM15Q9C019 465 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 ZNF665Q9H7R5 613 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 HIF1ANQ9NWT6 349 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 B9D1Q9UPM9 204 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 SAMHD1Q9Y3Z3 626 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 WIPI2Q9Y4P8 454 aa10.79□□□□□ -0.68
NPLOC4-213ENST00000573519 IGLV1-36A0A0B4J1U3 117 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 OR6C6A6NF89 314 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 ARPC3O15145 178 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 RAP2AP10114 183 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 TUBG1P23258 451 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 TNFSF4P23510 183 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 LMO4P61968 165 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 KCNMB1Q16558 191 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 FAHD2BQ6P2I3 314 aaPredicted RBP10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 CORO6Q6QEF8 472 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 PEG10Q86TG7 708 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 SPATA24Q86W54 205 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 LINC00346Q8IVM7 164 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 OR5AS1Q8N127 324 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 OR6V1Q8N148 313 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 AQP11Q8NBQ7 271 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 OR52L1Q8NGH7 329 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 OR2AJ1Q8NGZ0 328 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 CANT1Q8WVQ1 401 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 RAB39BQ96DA2 213 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 FAHD2AQ96GK7 314 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 COG8Q96MW5 612 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 GAL3ST1Q99999 423 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 CDADC1Q9BWV3 514 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 PLA2G12AQ9BZM1 189 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 REEP1Q9H902 201 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 TUBG2Q9NRH3 451 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 PTTG3PQ9NZH4 202 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 PURGQ9UJV8 347 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 LHFPL6Q9Y693 200 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 CDH10Q9Y6N8 788 aa10.78□□□□□ -0.68
NPLOC4-213ENST00000573519 DNHD1Q96M86 4753 aa10.77□□□□□ -0.68
NPLOC4-213ENST00000573519 DHRS12A0PJE2 317 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 AQP12BA6NM10 295 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 DNAJC8O75937 253 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 ANPEPP15144 967 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 RGS6P49758 472 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 SLC3A1Q07837 685 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 BNIP1Q12981 228 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 HNRNPA0Q13151 305 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 HLXQ14774 488 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 SLC36A3Q495N2 470 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 SPRNQ5BIV9 151 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 ACSM5Q6NUN0 579 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 SHQ1Q6PI26 577 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 AQP12AQ8IXF9 295 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 OR5L1Q8NGL2 311 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 OR8D4Q8NGM9 314 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 PTP4A1Q93096 173 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 DCLRE1CQ96SD1 692 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 CADM1Q9BY67 442 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 HDHD2Q9H0R4 259 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 UBAP1Q9NZ09 502 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 KLHL21Q9UJP4 597 aa10.77□□□□□ -0.69
NPLOC4-213ENST00000573519 OR6C68A6NDL8 312 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 GSC2O15499 205 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 IDH3BO43837 385 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 SOX14O95416 240 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 CST1P01037 141 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 CD55P08174 381 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 ADH4P08319 380 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 TNFRSF1AP19438 455 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 KITLGP21583 273 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 THBS2P35442 1172 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 COX10Q12887 443 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 CDK5R2Q13319 367 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 FLOT2Q14254 428 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 MICAQ29983 383 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 RPL13AP3Q6NVV1 102 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 RASSF6Q6ZTQ3 369 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 TMEM179BQ7Z7N9 219 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 LINC00471Q8N535 108 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 ATG16L2Q8NAA4 619 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 CYB561A3Q8NBI2 242 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 SLC26A10Q8NG04 563 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 OR10G2Q8NGC3 310 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 APOBEC3DQ96AK3 386 aaPredicted RBP10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 HAVCR1Q96D42 359 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 PITX2Q99697 317 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 COQ7Q99807 217 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 METTL17Q9H7H0 456 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms